RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TRMT12Q53H54 448 aaKnown RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 PEAR1Q5VY43 1037 aaPredicted RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 ZCCHC12Q6PEW1 402 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 WDR74Q6RFH5 385 aaPredicted RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 C16orf62Q7Z3J2 963 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 KMT5CQ86Y97 462 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 C8orf59Q8N0T1 100 aaPredicted RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 SHISA5Q8N114 240 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 Q8N9G6 341 aaPredicted RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 RSPO3Q9BXY4 272 aaPredicted RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 HCN3Q9P1Z3 774 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 KCND3Q9UK17 655 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 CASC3O15234 703 aaKnown RBP20.58■□□□□ 0.89
PTPN13-205ENST00000502971 YKT6O15498 198 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 CTNSO60931 367 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 SEC24DO94855 1032 aaPredicted RBP20.58■□□□□ 0.89
PTPN13-205ENST00000502971 CD1CP29017 333 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 PIGAP37287 484 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 RPS6KA3P51812 740 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 COL9A2Q14055 689 aaPredicted RBP20.58■□□□□ 0.89
PTPN13-205ENST00000502971 MICAQ29983 383 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 PRSS42Q7Z5A4 293 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 THAP5Q7Z6K1 395 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 TSPAN14Q8NG11 270 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 PIGKQ92643 395 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 CTHRC1Q96CG8 243 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 PINK1Q9BXM7 581 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 SPRTNQ9H040 489 aaPredicted RBP20.58■□□□□ 0.89
PTPN13-205ENST00000502971 C11orf16Q9NQ32 467 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 KRT84Q9NSB2 600 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 ACER3Q9NUN7 267 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 MAT2BQ9NZL9 334 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 DSPPQ9NZW4 1301 aa20.58■□□□□ 0.89
PTPN13-205ENST00000502971 MYOCOSA0A1B0GUC4 107 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 J3KTA2 159 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 GADD45GO95257 159 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 HOXD12P35452 270 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 LIMS1P48059 325 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 MGAT2Q10469 447 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 D2HGDHQ8N465 521 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 SLC16A11Q8NCK7 471 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 PEX11GQ96HA9 241 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 PSD2Q9BQI7 771 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 FAM192AQ9GZU8 254 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 SLC38A1Q9H2H9 487 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 PIGUQ9H490 435 aa20.58■□□□□ 0.88
PTPN13-205ENST00000502971 CLDN4O14493 209 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 GALR2O43603 387 aaPredicted RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 MITFO75030 526 aaPredicted RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 ANXA8P13928 327 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 CSF2RBP32927 897 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 RPL5P46777 297 aaKnown RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 TPD52P55327 224 aaPredicted RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 HPCAP84074 193 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 EXOC3L2Q2M3D2 409 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 ARHGAP11BQ3KRB8 267 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 EXOSC6Q5RKV6 272 aaKnown RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 GALNT5Q7Z7M9 940 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 OR10G2Q8NGC3 310 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 OR4C6Q8NH72 309 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 SAP25Q8TEE9 199 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 CCDC74AQ96AQ1 378 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 MMABQ96EY8 250 aaPredicted RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 SLC41A2Q96JW4 573 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 TRIM45Q9H8W5 580 aaPredicted RBP20.57■□□□□ 0.88
PTPN13-205ENST00000502971 SLC9A8Q9Y2E8 581 aa20.57■□□□□ 0.88
PTPN13-205ENST00000502971 TRIM64A6NGJ6 449 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 OR10H2O60403 315 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 LGI1O95970 557 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 ALPPP05187 535 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 PABPC4LP0CB38 370 aaKnown RBP20.56■□□□□ 0.88
PTPN13-205ENST00000502971 SEPHS1P49903 392 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 IGLV3-21P80748 117 aaPredicted RBP20.56■□□□□ 0.88
PTPN13-205ENST00000502971 CHRNEQ04844 493 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 MAP4K2Q12851 820 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 SLC13A2Q13183 592 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 KCNAB1Q14722 419 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 NR0B2Q15466 257 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 HLA-BQ31612 363 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 COLEC12Q5KU26 742 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 TCTN3Q6NUS6 607 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 CDRT4Q8N9R6 151 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 OR52J3Q8NH60 311 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 PHF10Q8WUB8 498 aaKnown RBP20.56■□□□□ 0.88
PTPN13-205ENST00000502971 SLC9A6Q92581 669 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 CDS1Q92903 461 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 GRIP2Q9C0E4 1043 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 ING2Q9H160 280 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 RIBC2Q9H4K1 309 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 PRTFDC1Q9NRG1 225 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 TUBA8Q9NY65 449 aaPredicted RBP20.56■□□□□ 0.88
PTPN13-205ENST00000502971 ARRDC5A6NEK1 342 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 H3BMH7 237 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 SYT5O00445 386 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 BCKDKO14874 412 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 PCDHGA12O60330 932 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 OR2B3O76000 313 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 ALOX5P09917 674 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 MSL3P1P0C860 447 aa20.56■□□□□ 0.88
PTPN13-205ENST00000502971 ACP2P11117 423 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms