RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CLIC1O00299 241 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 ACOX3O15254 700 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 WT1P19544 449 aaPredicted RBP18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 CDKN2CP42773 168 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 PGDP52209 483 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 MRPS35P82673 323 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 TP53BP2Q13625 1128 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 ATP1A4Q13733 1029 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 ZNHIT3Q15649 155 aaPredicted RBP18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 BTBD16Q32M84 506 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 SPDYE7PQ495Y7 208 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 FAM69BQ5VUD6 431 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 MFSD12Q6NUT3 480 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 CDC73Q6P1J9 531 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 SLC29A4Q7RTT9 530 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 YTHDF3Q7Z739 585 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 ARHGAP24Q8N264 748 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 METTL25Q8N6Q8 603 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 CLEC1AQ8NC01 280 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 OR52N2Q8NGI0 321 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 C16orf52Q8NHV5 167 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 NUDT9Q9BW91 350 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 VAPAQ9P0L0 249 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 ZNF451Q9Y4E5 1061 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 SNX8Q9Y5X2 465 aa18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 URB1O60287 2271 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-209ENST00000497470 CEP295Q9C0D2 2601 aa18.33■□□□□ 0.53
SCAMP3-209ENST00000497470 CDC14CA4D256 554 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 A8MUA0 341 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 C1QTNF9BB2RNN3 333 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 TO15178 435 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 NKX2-8O15522 239 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 DNAJA2O60884 412 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 UBOX5O94941 541 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 NKX2-2O95096 273 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 UNC5CO95185 931 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 AK1P00568 194 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 HMGN2P05204 90 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 C1QTNF9P0C862 333 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 NAGAP17050 411 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 LCN1P31025 176 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 TMPRSS3P57727 454 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 RNF4P78317 190 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 GAB1Q13480 694 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 EBPQ15125 230 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 C16orf89Q6UX73 402 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 MSRB3Q8IXL7 192 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 DND1Q8IYX4 353 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 PGAM4Q8N0Y7 254 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 ZNF441Q8N8Z8 693 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 OR52R1Q8NGF1 315 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 OIT3Q8WWZ8 545 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 PMM1Q92871 262 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 ADIPOR1Q96A54 375 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 HSPBAP1Q96EW2 488 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 NPAS2Q99743 824 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 PIGUQ9H490 435 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 ZNF160Q9HCG1 818 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 SLAMF8Q9P0V8 285 aa18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 ZNF223Q9UK11 482 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 FAF1Q9UNN5 650 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 GPR55Q9Y2T6 319 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 NUP214P35658 2090 aaPredicted RBP18.33■□□□□ 0.52
SCAMP3-209ENST00000497470 IGHV3-20A0A0C4DH32 117 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 MYOCOSA0A1B0GUC4 107 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 AIM2O14862 343 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 CBX6O95503 412 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 EFNA1P20827 205 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 SSTR4P31391 388 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 MAN2A2P49641 1150 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 MVDP53602 400 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 DUSP8Q13202 625 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 CYP27C1Q4G0S4 372 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 NANOGP8Q6NSW7 305 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC5A8Q8N695 610 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 ZCCHC14Q8WYQ9 949 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 NAF1Q96HR8 494 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 CPPED1Q9BRF8 314 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 DEFB126Q9BYW3 111 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 NANOGQ9H9S0 305 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC6A13Q9NSD5 602 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 BCAP29Q9UHQ4 241 aa18.32■□□□□ 0.52
SCAMP3-209ENST00000497470 C2orf92A0A1B0GVN3 265 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 FRG2CA6NGY1 282 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 HRKO00198 91 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC6A2P23975 617 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 SOAT1P35610 550 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 CHI3L1P36222 383 aaPredicted RBP18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 NUDT2P50583 147 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 RGNQ15493 299 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 SERPINA11Q86U17 422 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 C9orf40Q8IXQ3 194 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 LCORQ96JN0 433 aaPredicted RBP18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC35G5Q96KT7 338 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 WWTR1Q9GZV5 400 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 LHPPQ9H008 270 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 TMEM38AQ9H6F2 299 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 KAT8Q9H7Z6 458 aaKnown RBP18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 FOLH1BQ9HBA9 442 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms