RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 NRBP1Q9UHY1 535 aa2.07□□□□□ -2.08
VPS26A-208ENST00000497022 LEF1Q9UJU2 399 aaPredicted RBP2.07□□□□□ -2.08
VPS26A-208ENST00000497022 SYNJ2O15056 1496 aa2.07□□□□□ -2.08
VPS26A-208ENST00000497022 RSPH10B2B2RC85 870 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 SH2D1BO14796 132 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 EMC8O43402 210 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 LCMT2O60294 686 aaKnown RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 PDE5AO76074 875 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 RSPH10BP0C881 870 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 RPA1P27694 616 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 DIO3P55073 304 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 ZNF85Q03923 595 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 STXBP2Q15833 593 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 SHROOM1Q2M3G4 852 aaPredicted RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 HKDC1Q2TB90 917 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 KBTBD12Q3ZCT8 623 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 GLYR1Q49A26 553 aaPredicted RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 EPC2Q52LR7 807 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 KCTD11Q693B1 232 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 ERICH1Q86X53 443 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 RNF175Q8N4F7 328 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 Q8N9L7 120 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 RFESDQ8TAC1 157 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 CPXM1Q96SM3 734 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 JPH2Q9BR39 696 aaPredicted RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 FUNDC2Q9BWH2 189 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 ZCCHC17Q9NP64 241 aaKnown RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 SLC9A8Q9Y2E8 581 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 RPH3AQ9Y2J0 694 aaPredicted RBP2.06□□□□□ -2.08
VPS26A-208ENST00000497022 FLVCR1Q9Y5Y0 555 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
VPS26A-208ENST00000497022 NPIPA5A0A0B4J1W7 369 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 NPIPA5E9PKD4 350 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 PDXKO00764 312 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 REC8O95072 547 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 IGHV3-23P01764 117 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 IGHV1-2P23083 117 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 HAND2P61296 217 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 ZIC1Q15915 447 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 IL17AQ16552 155 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 CDC42EP5Q6NZY7 148 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 ASRGL1Q7L266 308 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 PIWIL3Q7Z3Z3 882 aaKnown RBP2.05□□□□□ -2.08
VPS26A-208ENST00000497022 ERI1Q8IV48 349 aaKnown RBP2.05□□□□□ -2.08
VPS26A-208ENST00000497022 MKXQ8IYA7 352 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 FNDC8Q8TC99 324 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 SLC25A38Q96DW6 304 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 RPGRIP1Q96KN7 1286 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 ZMAT2Q96NC0 199 aaKnown RBP2.05□□□□□ -2.08
VPS26A-208ENST00000497022 DDX50Q9BQ39 737 aaKnown RBP2.05□□□□□ -2.08
VPS26A-208ENST00000497022 DPH7Q9BTV6 452 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 HCAR1Q9BXC0 346 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 OPN3Q9H1Y3 402 aaPredicted RBP2.05□□□□□ -2.08
VPS26A-208ENST00000497022 TSPY26PQ9H489 355 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 RNPEPL1Q9HAU8 725 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 MAGEF1Q9HAY2 307 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 PDE10AQ9Y233 779 aa2.05□□□□□ -2.08
VPS26A-208ENST00000497022 A0A0A6YYC8 382 aaPredicted RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 A0A0U1RQK1 487 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 I3L1I5 382 aaPredicted RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 EI24O14681 340 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 RANBP6O60518 1105 aaKnown RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 GMNNO75496 209 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 HOXB7P09629 217 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 CCDC166P0CW27 439 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 ACADSBP45954 432 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 GEMP55040 296 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 RPS8P62241 208 aaKnown RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 ASIC1P78348 528 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 GK2Q14410 553 aaPredicted RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 LTBP1Q14766 1721 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 PRR4Q16378 134 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 KYAT1Q16773 422 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 SBK1Q52WX2 424 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 ATRAIDQ6UW56 229 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 TFAP2EQ6VUC0 442 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 MOB1BQ7L9L4 216 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 STHQ8IWL8 128 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 CADM2Q8N3J6 435 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 NFAM1Q8NET5 270 aaPredicted RBP2.04□□□□□ -2.08
VPS26A-208ENST00000497022 SPATA17Q96L03 361 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 VPS54Q9P1Q0 977 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 SLC2A6Q9UGQ3 507 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 NEU3Q9UQ49 428 aa2.04□□□□□ -2.08
VPS26A-208ENST00000497022 TRIM49D1C9J1S8 452 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 STX6O43752 255 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 RTN2O75298 545 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 H2AFZP0C0S5 128 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 GHRP10912 638 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 VCLP18206 1134 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 UGT1A6P19224 532 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 FCARP24071 287 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 MAT2AP31153 395 aaKnown RBP2.03□□□□□ -2.08
VPS26A-208ENST00000497022 OR3A4PP47883 348 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 SERPINH1P50454 418 aaKnown RBP2.03□□□□□ -2.08
VPS26A-208ENST00000497022 METAP1P53582 386 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 SNU13P55769 128 aaKnown RBP2.03□□□□□ -2.08
VPS26A-208ENST00000497022 HERV-K104P63124 156 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 EXOSC7Q15024 291 aaKnown RBP2.03□□□□□ -2.08
VPS26A-208ENST00000497022 DCAF4L1Q3SXM0 396 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms