RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IKBIPQ70UQ0 350 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 IQCHQ86VS3 1027 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TIGD4Q8IY51 512 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 POGLUT1Q8NBL1 392 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 SLC9A6Q92581 669 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TMED9Q9BVK6 235 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 CPEB1Q9BZB8 566 aaKnown RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 LIPT1Q9Y234 373 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 ASB4Q9Y574 426 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TCF20Q9UGU0 1960 aaKnown RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 CIB4A0PJX0 185 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TSC22D2O75157 780 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 RAF1P04049 648 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 SNRPD1P62314 119 aaKnown RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 SLC36A4Q6YBV0 504 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 LHFPL3Q86UP9 236 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 MARCH9Q86YJ5 346 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 CRIPAKQ8N1N5 446 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TBC1D19Q8N5T2 526 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 ZNF366Q8N895 744 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 ARL14EPQ8N8R7 260 aaPredicted RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 CHST14Q8NCH0 376 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 RAET1EQ8TD07 263 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 ZDHHC6Q9H6R6 413 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 NT5DC2Q9H857 520 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 GPBP1L1Q9HC44 474 aaPredicted RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 C2orf92A0A1B0GVN3 265 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TEX28O15482 410 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 SEPT4O43236 478 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 BNIP3LO60238 219 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 C1orf105O95561 183 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 CATP04040 527 aaKnown RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 ACSM1Q08AH1 577 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 GPNMBQ14956 572 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 SNAPC1Q16533 368 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 HENMT1Q5T8I9 393 aaKnown RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 OLIG3Q7RTU3 272 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 PRICKLE2Q7Z3G6 844 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 NEIL3Q8TAT5 605 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 SORCS2Q96PQ0 1159 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 TREX2Q9BQ50 279 aaPredicted RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 ERVMER34-1Q9H9K5 563 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 FOLH1BQ9HBA9 442 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 ZNF334Q9HCZ1 680 aaPredicted RBP14.48□□□□□ -0.09
SDF4-207ENST00000494748 MGAT4AQ9UM21 535 aa14.48□□□□□ -0.09
SDF4-207ENST00000494748 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 ALDH1A1P00352 501 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 THBS2P35442 1172 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 FRKP42685 505 aaPredicted RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 DCDC1P59894 354 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 MRPL28Q13084 256 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 SYPL1Q16563 259 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 TCTN1Q2MV58 587 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 BCL2L15Q5TBC7 163 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 Q6ZVL8 140 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 IQCF2Q8IXL9 164 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 ZNF655Q8N720 491 aaPredicted RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 FIBINQ8TAL6 211 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 SAP130Q9H0E3 1048 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 SMG9Q9H0W8 520 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 MRPL39Q9NYK5 338 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 HS3ST2Q9Y278 367 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 NCKAP1Q9Y2A7 1128 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 YIPF1Q9Y548 306 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 C5orf58C9J3I9 102 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 SH3BP5O60239 455 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 ABLIM3O94929 683 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 NTN1O95631 604 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 CXCL3P19876 107 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 ETV3P41162 512 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 CLCNKAP51800 687 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 PCBP4P57723 403 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 POU6F2P78424 691 aaPredicted RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 ELAVL2Q12926 359 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 ADAM15Q13444 863 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 TYW3Q6IPR3 259 aaKnown RBP14.47□□□□□ -0.09
SDF4-207ENST00000494748 EMC7Q9NPA0 242 aa14.47□□□□□ -0.09
SDF4-207ENST00000494748 CD8B2A6NJW9 211 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 MPC2O95563 127 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 CD8BP10966 210 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 NAGAP17050 411 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 SOX9P48436 509 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 PRLHRP49683 370 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 SMSP52788 366 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 TAF1CQ15572 869 aaPredicted RBP14.46□□□□□ -0.09
SDF4-207ENST00000494748 NDUFA9Q16795 377 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 ZNF57Q68EA5 555 aaPredicted RBP14.46□□□□□ -0.09
SDF4-207ENST00000494748 GPR139Q6DWJ6 353 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 RAET1GQ6H3X3 334 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 C6orf120Q7Z4R8 191 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 OR4F15Q8NGB8 312 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 ZNF431Q8TF32 576 aaPredicted RBP14.46□□□□□ -0.09
SDF4-207ENST00000494748 EFCAB11Q9BUY7 163 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 TBC1D17Q9HA65 648 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 CYSLTR2Q9NS75 346 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 PHF11Q9UIL8 331 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 POLHQ9Y253 713 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 ANKDD1BA6NHY2 528 aa14.46□□□□□ -0.09
SDF4-207ENST00000494748 ANGPT1Q15389 498 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms