RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RPS13P62277 151 aaKnown RBP7.43□□□□□ -1.22
USP39-216ENST00000490193 FAM27E3Q08E93 113 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 TOMM20Q15388 145 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 HLA-DQA1Q5Y7H0 255 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 OR52E8Q6IFG1 317 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 ANGPTL8Q6UXH0 198 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 NUP54Q7Z3B4 507 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 GALNT12Q8IXK2 581 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 OR7G1Q8NGA0 311 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 HUS1BQ8NHY5 278 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 UBTD2Q8WUN7 234 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 HGDQ93099 445 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CAVIN3Q969G5 261 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 STARD4Q96DR4 205 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 PIK3IP1Q96FE7 263 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 UBXN10Q96LJ8 280 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 OSBPL11Q9BXB4 747 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 NXF5Q9H1B4 397 aaKnown RBP7.43□□□□□ -1.22
USP39-216ENST00000490193 OR10A5Q9H207 317 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 METTL7AQ9H8H3 244 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 ACTR8Q9H981 624 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 UBTD1Q9HAC8 227 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 WDR41Q9HAD4 459 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 ZNF701Q9NV72 531 aaPredicted RBP7.43□□□□□ -1.22
USP39-216ENST00000490193 PSD3Q9NYI0 1048 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 CD274Q9NZQ7 290 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 DLGAP4Q9Y2H0 992 aa7.43□□□□□ -1.22
USP39-216ENST00000490193 MRPS18CQ9Y3D5 142 aaKnown RBP7.43□□□□□ -1.22
USP39-216ENST00000490193 NBEAL1Q6ZS30 2694 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 LRRC14BA6NHZ5 514 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 GLOD5A6NK44 160 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 WASHC1A8K0Z3 465 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 GOLGA6L6A8MZA4 724 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 E7ESA3 106 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 K7EPI3 171 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 PLOD2O00469 737 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 ICOSLGO75144 302 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 EEDO75530 441 aaKnown RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 AIFM1O95831 613 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 FAM58BPP0C7Q3 252 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 ZNF708P17019 499 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 KRT15P19012 456 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 S1PR1P21453 382 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 PTX3P26022 381 aaPredicted RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 SRD5A2P31213 254 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 UGT2B10P36537 528 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 CPOXP36551 454 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 SLC12A2P55011 1212 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 CLDN18P56856 261 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 CUL3Q13618 768 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 CAPRIN1Q14444 709 aaKnown RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 ZKSCAN8Q15776 578 aaPredicted RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 BCL2A1Q16548 175 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 OR2A2Q6IF42 318 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 HEPHL1Q6MZM0 1159 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 IFNEQ86WN2 208 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 GRAMD2AQ8IUY3 354 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 TRIM42Q8IWZ5 723 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 PRR22Q8IZ63 422 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 RNF175Q8N4F7 328 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 SPATA6LQ8N4H0 392 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 WDSUB1Q8N9V3 476 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 OR14L1PQ8NHC6 308 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 TSPAN17Q96FV3 270 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 NODALQ96S42 347 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 GPR22Q99680 433 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 MED18Q9BUE0 208 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 SERHLQ9NQF3 203 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 KLHL28Q9NXS3 571 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 ELOVL5Q9NYP7 299 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 NUDT4Q9NZJ9 180 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 OPTCQ9UBM4 332 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 MTO1Q9Y2Z2 717 aaKnown RBP7.42□□□□□ -1.22
USP39-216ENST00000490193 PCDHGA11Q9Y5H2 935 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 CR1P17927 2039 aa7.42□□□□□ -1.22
USP39-216ENST00000490193 ROS1P08922 2347 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 A0A1W2PS29 197 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 H0YIV9 168 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PGRMC2O15173 223 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 TO15178 435 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 ACOX3O15254 700 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 TP73O15350 636 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PHGDHO43175 533 aaKnown RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 UGDHO60701 494 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 TGM6O95932 706 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 CGAP01215 116 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 S100BP04271 92 aaPredicted RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 CD8BP10966 210 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 EPB42P16452 691 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 STMN1P16949 149 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PIK3R1P27986 724 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 ARL4CP56559 192 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 WDR4P57081 412 aaKnown RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 PHEXP78562 749 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 SRYQ05066 204 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms