RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 A0A0A6YYC8 382 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 A0A1W2PS29 197 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 I3L1I5 382 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 HS6ST1O60243 411 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 THBS1P07996 1170 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 SYPP08247 313 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 ALOX5P09917 674 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 NT5EP21589 574 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 IGFBP5P24593 272 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 DAPP51397 102 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 DUSP3P51452 185 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 TOP3AQ13472 1001 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 APOFQ13790 326 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 LTB4RQ15722 352 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 ZSWIM7Q19AV6 140 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 MICAQ29983 383 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 COLEC12Q5KU26 742 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 NKAIN2Q5VXU1 208 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 FAM111BQ6SJ93 734 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 SZRD1Q7Z422 152 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 THAP5Q7Z6K1 395 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 ZBTB44Q8NCP5 570 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 SETD9Q8NE22 299 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 OR5D16Q8NGK9 328 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 ADAMTS16Q8TE57 1224 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 PIGKQ92643 395 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 COL26A1Q96A83 441 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 CCDC74AQ96AQ1 378 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 C16orf58Q96GQ5 468 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 LOXL4Q96JB6 756 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 MAGED4Q96JG8 741 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 LMF2Q9BU23 707 aaKnown RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 POLR2J2Q9GZM3 115 aaKnown RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 POLR2J3Q9H1A7 115 aaKnown RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 CXorf21Q9HAI6 301 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 FANCEQ9HB96 536 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 PRTFDC1Q9NRG1 225 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 STARD5Q9NSY2 213 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 CUTCQ9NTM9 273 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 ACER3Q9NUN7 267 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 PDP1Q9P0J1 537 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 SERTAD3Q9UJW9 196 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 GMEB2Q9UKD1 530 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 MAGED1Q9Y5V3 778 aaPredicted RBP10.88□□□□□ -0.67
PRKCB-207ENST00000486868 GON4LQ3T8J9 2241 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 CACNA1IQ9P0X4 2223 aa10.88□□□□□ -0.67
PRKCB-207ENST00000486868 KNL1Q8NG31 2342 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 EML5Q05BV3 1969 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 LY6G6EA0A0G2JKS1 128 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 FAM227AF5H4B4 570 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 OR10H2O60403 315 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 LDB3O75112 727 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 OR2B3O76000 313 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 NKX2-2O95096 273 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 MED26O95402 600 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 ALPPP05187 535 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 PABPC4LP0CB38 370 aaKnown RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF883P0CG24 379 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 S1PR1P21453 382 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 CSF2RBP32927 897 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 RPL5P46777 297 aaKnown RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 STT3AP46977 705 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 PPM1FP49593 454 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 HPCAP84074 193 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SPIBQ01892 262 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 ACY1Q03154 408 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 DUSP8Q13202 625 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 KCNAB2Q13303 367 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 GPAT3Q53EU6 434 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 RBM48Q5RL73 367 aaKnown RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 TCTN3Q6NUS6 607 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 C16orf62Q7Z3J2 963 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SLC44A2Q8IWA5 706 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 OR4N5Q8IXE1 308 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 GALNT12Q8IXK2 581 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 GPR135Q8IZ08 494 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 HS3ST5Q8IZT8 346 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 C8orf59Q8N0T1 100 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 VWA5B2Q8N398 1253 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 PARP8Q8N3A8 854 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SMYD1Q8NB12 490 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SLC16A11Q8NCK7 471 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 TOR1AIP2Q8NFQ8 470 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 OR4D9Q8NGE8 314 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 FBLIM1Q8WUP2 373 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 RBM18Q96H35 190 aaKnown RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 MBOAT4Q96T53 435 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 PITX2Q99697 317 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 GABARAPL3Q9BY60 117 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 GRIP2Q9C0E4 1043 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF350Q9GZX5 532 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-207ENST00000486868 ANKRD19PQ9H560 264 aa10.87□□□□□ -0.67
PRKCB-207ENST00000486868 CACYBPQ9HB71 228 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms