RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TSPY1Q01534 308 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 SLC34A1Q06495 639 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 SCN1BQ07699 218 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 ORC2Q13416 577 aaPredicted RBP2.34□□□□□ -2.03
SCAF11-207ENST00000484275 ZIC1Q15915 447 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 LUZP1Q86V48 1076 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 FAM46BQ96A09 425 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 ULK4Q96C45 1275 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 ERP27Q96DN0 273 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 CDKN2AIPNLQ96HQ2 116 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 DHTKD1Q96HY7 919 aaPredicted RBP2.34□□□□□ -2.03
SCAF11-207ENST00000484275 PANX3Q96QZ0 392 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 THUMPD3Q9BV44 507 aaKnown RBP2.34□□□□□ -2.03
SCAF11-207ENST00000484275 OPN3Q9H1Y3 402 aaPredicted RBP2.34□□□□□ -2.03
SCAF11-207ENST00000484275 Q9H3A6 140 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 NANOGQ9H9S0 305 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 TUFT1Q9NNX1 390 aa2.34□□□□□ -2.03
SCAF11-207ENST00000484275 PRG3Q9Y2Y8 225 aaPredicted RBP2.34□□□□□ -2.03
SCAF11-207ENST00000484275 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 GPX5O75715 221 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 RAD51DO75771 328 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 HPNP05981 417 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 TPBGLP0DKB5 382 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 MBL2P11226 248 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 CASTP20810 708 aaKnown RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 SAA4P35542 130 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 PMELP40967 661 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 SLC26A2P50443 739 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 SLC12A3P55017 1021 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 KCTD19Q17RG1 926 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 PET117Q6UWS5 81 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 NUP93Q8N1F7 819 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 CADM2Q8N3J6 435 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF397Q8NF99 534 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 OR10H4Q8NGA5 316 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 OR4L1Q8NH43 312 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 FNDC8Q8TC99 324 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 MRPL53Q96EL3 112 aaKnown RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 COG3Q96JB2 828 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 EDEM3Q9BZQ6 932 aa2.33□□□□□ -2.04
SCAF11-207ENST00000484275 ARMCX3Q9UH62 379 aaPredicted RBP2.33□□□□□ -2.04
SCAF11-207ENST00000484275 LTBP1Q14766 1721 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 OOEPA6NGQ2 149 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 SDR42E2A6NKP2 422 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 OR7A17O14581 309 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
SCAF11-207ENST00000484275 NOL4O94818 638 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 TXNDC12O95881 172 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 CT45A8P0DMV1 189 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 CT45A9P0DMV2 189 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 EPC2Q52LR7 807 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 CT45A2Q5DJT8 189 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 LRRC38Q5VT99 294 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 LINC00518Q8N0U6 118 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 UBTD2Q8WUN7 234 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 DEPDC1BQ8WUY9 529 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 AP2M1Q96CW1 435 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 EPSTI1Q96J88 318 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 GUCD1Q96NT3 240 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 SPAG8Q99932 426 aaPredicted RBP2.32□□□□□ -2.04
SCAF11-207ENST00000484275 NRN1Q9NPD7 142 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 TMEM161AQ9NX61 479 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 TUBGCP4Q9UGJ1 667 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 FBXL5Q9UKA1 691 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 MRTO4Q9UKD2 239 aaKnown RBP2.32□□□□□ -2.04
SCAF11-207ENST00000484275 KIF7Q2M1P5 1343 aa2.32□□□□□ -2.04
SCAF11-207ENST00000484275 A0A0A6YYC8 382 aaPredicted RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 A0A0U1RQK1 487 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 I3L1I5 382 aaPredicted RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 WWP2O00308 870 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CYB561D2O14569 222 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 TTI1O43156 1089 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 PDE5AO76074 875 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 C8orf89P0DMQ9 161 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 SERPINB6P35237 376 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 UGT1A3P35503 534 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 DAZ2Q13117 558 aaKnown RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 KLF5Q13887 457 aaPredicted RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 GIT2Q14161 759 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 HAGHQ16775 308 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CCDC158Q5M9N0 1113 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 ASPHD2Q6ICH7 369 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 TRPM8Q7Z2W7 1104 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CCDC83Q8IWF9 413 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 TUSC5Q8IXB3 177 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF786Q8N393 782 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 ATAD1Q8NBU5 361 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 BBS1Q8NFJ9 593 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 HAS2Q92819 552 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CCDC114Q96M63 670 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 MLPHQ9BV36 600 aaPredicted RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 TSSK1BQ9BXA7 367 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CARD9Q9H257 536 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 OR51J1Q9H342 316 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 DCTPP1Q9H773 170 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 TMEM206Q9H813 350 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 DAZ3Q9NR90 486 aaKnown RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 VPS18Q9P253 973 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms