RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 OR14L1PQ8NHC6 308 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 OMA1Q96E52 524 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 PHF21BQ96EK2 531 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 GPR78Q96P69 363 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 HBEGFQ99075 208 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 G6PC3Q9BUM1 346 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 OSBPL11Q9BXB4 747 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 VPS11Q9H270 941 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 KLRF1Q9NZS2 232 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 FOXD3Q9UJU5 478 aaPredicted RBP12.66□□□□□ -0.38
VARS-226ENST00000483275 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
VARS-226ENST00000483275 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 FOXE1O00358 373 aaPredicted RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 SNPHO15079 494 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 ICOSLGO75144 302 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 UGT2B11O75310 529 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 ERAL1O75616 437 aaKnown RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 CLDN9O95484 217 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 ALDOAP04075 364 aaKnown RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 GSTA2P09210 222 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 PCSK2P16519 638 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 TSPAN8P19075 237 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 CD53P19397 219 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 GALNSP34059 522 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 OPRM1P35372 400 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 CCNG1P51959 295 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 MRPS35P82673 323 aaKnown RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 SORDQ00796 357 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 MGAT2Q10469 447 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 TRAF3Q13114 568 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 RCAN2Q14206 197 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 NHSL2Q5HYW2 709 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 CCNYL2Q5T2Q4 361 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 TTC19Q6DKK2 380 aaPredicted RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 CYS1Q717R9 158 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 COMMD6Q7Z4G1 85 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 C7orf57Q8NEG2 295 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 SPATA4Q8NEY3 305 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 RHEBL1Q8TAI7 183 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 C16orf45Q96MC5 204 aaPredicted RBP12.65□□□□□ -0.38
VARS-226ENST00000483275 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 MAT2BQ9NZL9 334 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 PLLPQ9Y342 182 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 IKBKGQ9Y6K9 419 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 FBN3Q75N90 2809 aa12.65□□□□□ -0.38
VARS-226ENST00000483275 ROS1P08922 2347 aa12.65□□□□□ -0.39
VARS-226ENST00000483275 PCNX3Q9H6A9 2034 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 SH3D21A4FU49 640 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 PRAMEF25A6NGN4 478 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 B4DXG7 233 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 UGDHO60701 494 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 SEMA3DO95025 777 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 KLHL2O95198 593 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 CBX7O95931 251 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 FOSL1P15407 271 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 PORP16435 677 aaPredicted RBP12.64□□□□□ -0.39
VARS-226ENST00000483275 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
VARS-226ENST00000483275 HOXC12P31275 282 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 ALDH9A1P49189 494 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 ARFIP1P53367 373 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 MAPK12P53778 367 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
VARS-226ENST00000483275 PRICKLE4Q2TBC4 344 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 TRMT12Q53H54 448 aaKnown RBP12.64□□□□□ -0.39
VARS-226ENST00000483275 FRG2Q64ET8 278 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 OR5M10Q6IEU7 315 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 TRIM42Q8IWZ5 723 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 WDSUB1Q8N9V3 476 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 OR52R1Q8NGF1 315 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 KLHL29Q96CT2 875 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 FRG2BQ96QU4 278 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 SECISBP2Q96T21 854 aaKnown RBP12.64□□□□□ -0.39
VARS-226ENST00000483275 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 ZBTB26Q9HCK0 441 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 FBXL2Q9UKC9 423 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 SLC12A4Q9UP95 1085 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 WIF1Q9Y5W5 379 aa12.64□□□□□ -0.39
VARS-226ENST00000483275 PPP6CO00743 305 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 SIAH2O43255 324 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 INHBBP09529 407 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 SERPINB8P50452 374 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 RPP38P78345 283 aaKnown RBP12.63□□□□□ -0.39
VARS-226ENST00000483275 NAB1Q13506 487 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 ACAP2Q15057 778 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 TCHHL1Q5QJ38 904 aaPredicted RBP12.63□□□□□ -0.39
VARS-226ENST00000483275 SLC48A1Q6P1K1 146 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 KLC3Q6P597 504 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 CLEC9AQ6UXN8 241 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 CXorf67Q86X51 503 aaPredicted RBP12.63□□□□□ -0.39
VARS-226ENST00000483275 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
VARS-226ENST00000483275 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms