RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 ISL2Q96A47 359 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 OMA1Q96E52 524 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
PTPN7-212ENST00000480836 CENPKQ9BS16 269 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 WDR41Q9HAD4 459 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 XPR1Q9UBH6 696 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 FETUBQ9UGM5 382 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
PTPN7-212ENST00000480836 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
PTPN7-212ENST00000480836 TUBAL3A6NHL2 446 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 SNPHO15079 494 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 SIAH2O43255 324 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 ERAL1O75616 437 aaKnown RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 IL2RAP01589 272 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 PCSK2P16519 638 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 CTSSP25774 331 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 CCNG1P51959 295 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 CLDN15P56746 228 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 CAV1Q03135 178 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 TOMM20Q15388 145 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 ZNF572Q7Z3I7 529 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 C17orf47Q8NEP4 570 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 OR52R1Q8NGF1 315 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 OR1J4Q8NGS1 313 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 ATP6V1E2Q96A05 226 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 REPS1Q96D71 796 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 ACSS3Q9H6R3 686 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 DMGDHQ9UI17 866 aaKnown RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 FBXL2Q9UKC9 423 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 ADAM29Q9UKF5 820 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 SLC12A4Q9UP95 1085 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 TNPO3Q9Y5L0 923 aaKnown RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
PTPN7-212ENST00000480836 MAP1AP78559 2803 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-212ENST00000480836 PCNX3Q9H6A9 2034 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 FAM47E-STBD1D6RA91 191 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 STX16-NPEPL1H3BU86 382 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 STX16O14662 325 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 ZIC3O60481 467 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 OR4F21O95013 312 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 TGM6O95932 706 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 HRGP04196 525 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 ATP1B1P05026 303 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 RPS17P08708 135 aaKnown RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CT45A8P0DMV1 189 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CT45A9P0DMV2 189 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CPN1P15169 458 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 ECHS1P30084 290 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 MAPK12P53778 367 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 GFRA1P56159 465 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CORO7P57737 925 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 SRYQ05066 204 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 OR5M10Q6IEU7 315 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 NPSR1Q6W5P4 371 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 NUP54Q7Z3B4 507 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 VWA5B2Q8N398 1253 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 C1orf52Q8N6N3 182 aaKnown RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 OR4N2Q8NGD1 307 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 GOT1L1Q8NHS2 421 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 ZPLD1Q8TCW7 415 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 TRPC4APQ8TEL6 797 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 LCORQ96JN0 433 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 FUT8Q9BYC5 575 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 RTN4RQ9BZR6 473 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 RAB17Q9H0T7 212 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 CALHM2Q9HA72 323 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 EXO1Q9UQ84 846 aaKnown RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 GPR55Q9Y2T6 319 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-212ENST00000480836 MED12LQ86YW9 2145 aa12.08□□□□□ -0.48
PTPN7-212ENST00000480836 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
PTPN7-212ENST00000480836 CCDC189A1A4V9 331 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 H0YC42 278 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 EEF1E1O43324 174 aaKnown RBP12.07□□□□□ -0.48
PTPN7-212ENST00000480836 NAGAP17050 411 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 CD53P19397 219 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 CSNK2A2P19784 350 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-212ENST00000480836 DRD5P21918 477 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 TCEA1P23193 301 aaKnown RBP12.07□□□□□ -0.48
PTPN7-212ENST00000480836 DNASE1P24855 282 aa12.07□□□□□ -0.48
PTPN7-212ENST00000480836 HOXC12P31275 282 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms