RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 MAGEB16A2A368 324 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 SURF4O15260 269 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 PRKAB2O43741 272 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 MAGEC1O60732 1142 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 NME6O75414 186 aaPredicted RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 CXCL14O95715 111 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SRD5A2P31213 254 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 HOXA6P31267 233 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SERPINB6P35237 376 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 MAGEB1P43366 347 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 CXCL12P48061 93 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 IRX4P78413 519 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 MRPS6P82932 125 aaKnown RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 ARF5P84085 180 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 FAM106AQ4KMX7 169 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 AARDQ4LEZ3 155 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SLC39A12Q504Y0 691 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 CELF3Q5SZQ8 465 aaKnown RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 GFI1BQ5VTD9 330 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 BSPRYQ5W0U4 402 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SLC27A4Q6P1M0 643 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 GET4Q7L5D6 327 aaPredicted RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 CHMP1BQ7LBR1 199 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 TRMT11Q7Z4G4 463 aaKnown RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 TEX26Q8N6G2 289 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 RNF149Q8NC42 400 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 LPCAT1Q8NF37 534 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 NR4A3Q92570 626 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 ZNF707Q96C28 371 aaPredicted RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 CFAP36Q96G28 342 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 CASD1Q96PB1 797 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 NEDD4LQ96PU5 975 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 ZNF300Q96RE9 604 aaPredicted RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 USP28Q96RU2 1077 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 IWS1Q96ST2 819 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SYT15Q9BQS2 421 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 TMEM117Q9H0C3 514 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 TMEM9BQ9NQ34 198 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 BARHL2Q9NY43 387 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 FBXW2Q9UKT8 454 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 ANGPTL3Q9Y5C1 460 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 URB1O60287 2271 aaKnown RBP4.25□□□□□ -1.73
RFC4-212ENST00000479307 KIF26BQ2KJY2 2108 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 F5P12259 2224 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 SDK1Q7Z5N4 2213 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 NOTCH2Q04721 2471 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 PTPRQQ9UMZ3 2332 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZNF532Q9HCE3 1301 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 TNRC6BQ9UPQ9 1833 aaKnown RBP4.24□□□□□ -1.73
RFC4-212ENST00000479307 hCG_38984A0A1B0GV85 526 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 CDX4O14627 284 aaPredicted RBP4.24□□□□□ -1.73
RFC4-212ENST00000479307 AKAP3O75969 853 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZFAND5O76080 213 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 PNPP00491 289 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 IGHEP01854 428 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 RNF224P0DH78 156 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 TYMPP19971 482 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 CTNNA2P26232 953 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 CA8P35219 290 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 MMP12P39900 470 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SLC1A3P43003 542 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SLC6A12P48065 614 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ATP12AP54707 1039 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 UBXN1Q04323 297 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 RPS6KA1Q15418 735 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 KCTD11Q693B1 232 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZER1Q7Z7L7 766 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SLC22A15Q8IZD6 547 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SPEM1Q8N4L4 309 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 CHCHD4Q8N4Q1 142 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SAP25Q8TEE9 199 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 DNAJB3Q8WWF6 145 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 RFT1Q96AA3 541 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZNF486Q96H40 463 aaPredicted RBP4.24□□□□□ -1.73
RFC4-212ENST00000479307 PDLIM5Q96HC4 596 aaKnown RBP4.24□□□□□ -1.73
RFC4-212ENST00000479307 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ART5Q96L15 291 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 PCDHB18PQ96TA0 734 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 TRIM7Q9C029 511 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 PRORYQ9H606 182 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZDHHC6Q9H6R6 413 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 MED20Q9H944 212 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 VIPAS39Q9H9C1 493 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 MID1IP1Q9NPA3 183 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 SCRT2Q9NQ03 307 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 RGS18Q9NS28 235 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ZDHHC18Q9NUE0 388 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 MAD2L2Q9UI95 211 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 LNPEPQ9UIQ6 1025 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ISY1Q9ULR0 285 aaKnown RBP4.24□□□□□ -1.73
RFC4-212ENST00000479307 CSNK1G3Q9Y6M4 447 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 MYH6P13533 1939 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 DOCK6Q96HP0 2047 aa4.24□□□□□ -1.73
RFC4-212ENST00000479307 ATG2BQ96BY7 2078 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 LRRK2Q5S007 2527 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 IQCMA0A1B0GVH7 501 aa4.23□□□□□ -1.73
RFC4-212ENST00000479307 SPAARA0A1B0GVQ0 90 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms