RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 JAGN1Q8N5M9 183 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PSD4Q8NDX1 1056 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 OR2T11Q8NH01 316 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 HS6ST2Q96MM7 605 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GPR78Q96P69 363 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CMKLR1Q99788 373 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 TTYH2Q9BSA4 534 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 NANSQ9NR45 359 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 RIMS3Q9UJD0 308 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 RARRES3Q9UL19 164 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 H0YIV9 168 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 SELPLGQ14242 412 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 NFATC4Q14934 902 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM225Q6GV28 225 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 MS4A4EQ96PG1 132 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 TUBA1CQ9BQE3 449 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 GPR83Q9NYM4 423 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 HCN2Q9UL51 889 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 HSPE1-MOB4S4R3N1 261 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PRODHO43272 600 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 DCDC1P59894 354 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 MRPS21P82921 87 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 SNTA1Q13424 505 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 C6orf132Q5T0Z8 1188 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CDH24Q86UP0 819 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 ACBD7Q8N6N7 88 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 OR5K2Q8NHB8 316 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 LPAR4Q99677 370 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 SLC30A2Q9BRI3 323 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 SRA1Q9HD15 236 aaKnown RBP13.47□□□□□ -0.25
NPHP4-208ENST00000478423 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
NPHP4-208ENST00000478423 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 A0A1W2PRG6 482 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 HTR1AP08908 422 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 HOXC12P31275 282 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 SOX2P48431 317 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 TAS2R43P59537 309 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 PITPNAQ00169 270 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 PLGLB1Q02325 96 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 SPNS2Q8IVW8 549 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 SGTBQ96EQ0 304 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 FAM46AQ96IP4 442 aaKnown RBP13.46□□□□□ -0.25
NPHP4-208ENST00000478423 NMNAT1Q9HAN9 279 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-208ENST00000478423 GXYLT2A0PJZ3 443 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 TP53I11O14683 189 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 LDB3O75112 727 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 NR2C1P13056 603 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 RAB15P59190 212 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 RPL13AP3Q6NVV1 102 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 SLCO4C1Q6ZQN7 724 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 USP22Q9UPT9 525 aa13.46□□□□□ -0.25
NPHP4-208ENST00000478423 SCN1AP35498 2009 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 A0A0J9YY10 115 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 SLC9B1P1A6NJY1 282 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 POLR1CO15160 346 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-208ENST00000478423 CYB5AP00167 134 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 GSTM2P28161 218 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 S100GP29377 79 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 RORAP35398 523 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 ACVR1Q04771 509 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 HNRNPA0Q13151 305 aaKnown RBP13.46□□□□□ -0.26
NPHP4-208ENST00000478423 RPE65Q16518 533 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 NEIL3Q8TAT5 605 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 TRIM43Q96BQ3 446 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-208ENST00000478423 ASB16Q96NS5 453 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 SLC22A4Q9H015 551 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 PAK1IP1Q9NWT1 392 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-208ENST00000478423 FTSJ1Q9UET6 329 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 GPR52Q9Y2T5 361 aa13.46□□□□□ -0.26
NPHP4-208ENST00000478423 TRAPPC13A5PLN9 417 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 FOXD2O60548 495 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 SNX29P2Q8IUI4 249 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 IQCF1Q8N6M8 205 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 L3MBTL4Q8NA19 623 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 C7orf57Q8NEG2 295 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 HIST1H2AAQ96QV6 131 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 FUNDC2Q9BWH2 189 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-208ENST00000478423 MMP27Q9H306 513 aa13.45□□□□□ -0.26
NPHP4-208ENST00000478423 TIGARQ9NQ88 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms