RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 EPHA1P21709 976 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 SOX4Q06945 474 aaPredicted RBP17.69■□□□□ 0.42
VARS2-209ENST00000477288 EIF4HQ15056 248 aaKnown RBP17.69■□□□□ 0.42
VARS2-209ENST00000477288 AWAT2Q6E213 333 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 TAS1R3Q7RTX0 852 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 CNN2Q99439 309 aaKnown RBP17.69■□□□□ 0.42
VARS2-209ENST00000477288 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 SNAP29O95721 258 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 BMPR1AP36894 532 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 SLC18A1P54219 525 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 DOC2AQ14183 400 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 LARP4Q71RC2 724 aaKnown RBP eCLIP17.69■□□□□ 0.429e-7■■□□□ 13.7
VARS2-209ENST00000477288 SIGLEC10Q96LC7 697 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 HS6ST2Q96MM7 605 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 TRIB3Q96RU7 358 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 GMLQ99445 158 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 HHATLQ9HCP6 504 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 TPPPO94811 219 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 GRB7Q14451 532 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 NTRK2Q16620 822 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 PAAF1Q9BRP4 392 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 TMEM246Q9BRR3 403 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 ADAMTS10Q9H324 1103 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 CDH20Q9HBT6 801 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 TMEM14AQ9Y6G1 99 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 SLC2A5P22732 501 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 UGT3A2Q3SY77 523 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
VARS2-209ENST00000477288 TCEAL4Q96EI5 215 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 IL20RAQ9UHF4 553 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 KLHL21Q9UJP4 597 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 KLF11O14901 512 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 SLC16A8O95907 504 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 HBQ1P09105 142 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 ZNF182P17025 639 aaPredicted RBP17.69■□□□□ 0.42
VARS2-209ENST00000477288 ATG9BQ674R7 924 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 GALNT6Q8NCL4 622 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 RRNAD1Q96FB5 475 aaKnown RBP17.69■□□□□ 0.42
VARS2-209ENST00000477288 PRELID1Q9Y255 219 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 PTGDR2Q9Y5Y4 395 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
VARS2-209ENST00000477288 NDUFV2P19404 249 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 CAPN3P20807 821 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 PIGGQ5H8A4 983 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 OR56B2PQ8NGI1 322 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 PLEKHO2Q8TD55 490 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 LPAR4Q99677 370 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 C2orf42Q9NWW7 574 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 OR6C6A6NF89 314 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 TMEM225BP0DP42 221 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 CAMLGP49069 296 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 SPATS1Q496A3 300 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 CENPSQ8N2Z9 138 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 LILRB2Q8N423 598 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 NANOS1Q8WY41 292 aaKnown RBP17.68■□□□□ 0.42
VARS2-209ENST00000477288 ZUFSPQ96AP4 578 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 SLC2A13Q96QE2 648 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ZNF559Q9BR84 538 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 FMO6PO60774 539 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 HTR2AP28223 471 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 RAB11BQ15907 218 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ZNF440Q8IYI8 595 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 NELL2Q99435 816 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 WDR6Q9NNW5 1121 aaKnown RBP17.68■□□□□ 0.42
VARS2-209ENST00000477288 GPR32O75388 356 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
VARS2-209ENST00000477288 FADDQ13158 208 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 RCAN2Q14206 197 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 KRBOX4Q5JUW0 171 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 OR8J3Q8NGG0 315 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 HUS1BQ8NHY5 278 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 PCYT2Q99447 389 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 YY2O15391 372 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 DRD2P14416 443 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 CD70P32970 193 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ACTA2P62736 377 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ACTG2P63267 376 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 POU4F2Q12837 409 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 KCNAB2Q13303 367 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 FGL2Q14314 439 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ADAMTS18Q8TE60 1221 aa17.68■□□□□ 0.42
VARS2-209ENST00000477288 ADH6P28332 368 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 ATP6AP1Q15904 470 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 OR9K2Q8NGE7 335 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 ARL6Q9H0F7 186 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 LMAN1LQ9HAT1 526 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
VARS2-209ENST00000477288 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 HMX3A6NHT5 357 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 HTR3BO95264 441 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 SOX3P41225 446 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 PITPNBP48739 271 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 GSG1LQ6UXU4 331 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 CHPT1Q8WUD6 406 aa17.67■□□□□ 0.42
VARS2-209ENST00000477288 FAM46AQ96IP4 442 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms