RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 GNRHR2Q96P88 292 aa9.89□□□□□ -0.83
SEC13-214ENST00000476597 KCNA7Q96RP8 456 aa9.89□□□□□ -0.83
SEC13-214ENST00000476597 SLC6A15Q9H2J7 730 aa9.89□□□□□ -0.83
SEC13-214ENST00000476597 NPDC1Q9NQX5 325 aaPredicted RBP9.89□□□□□ -0.83
SEC13-214ENST00000476597 PRODH2Q9UF12 536 aa9.89□□□□□ -0.83
SEC13-214ENST00000476597 UTS2RQ9UKP6 389 aa9.89□□□□□ -0.83
SEC13-214ENST00000476597 MAP1AP78559 2803 aaPredicted RBP9.89□□□□□ -0.83
SEC13-214ENST00000476597 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 A0A0G2JNJ9 132 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 GNG14A0A1W2PPG7 69 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CCDC151A5D8V7 595 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 FAM90A27PA6NNH2 459 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 FOXO6A8MYZ6 492 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 AHRRA9YTQ3 701 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TO15178 435 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 PCDH7O60245 1069 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CDH16O75309 829 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 GLRA3O75311 464 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TRAPPC6AO75865 159 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 BCAS2O75934 225 aaPredicted RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 PROCP04070 461 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 SHBGP04278 402 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 PCSK2P16519 638 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 KRT15P19012 456 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ELAVL4P26378 380 aaKnown RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 GDF1P27539 372 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 MSX1P28360 303 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.83
SEC13-214ENST00000476597 ADH7P40394 386 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CCT5P48643 541 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TRPC1P48995 793 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CDK9P50750 372 aaKnown RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 FOXA1P55317 472 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 KRTAP10-9P60411 292 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 NAA20P61599 178 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 MRPS35P82673 323 aaKnown RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 HEPACAMQ14CZ8 416 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 LTB4RQ15722 352 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CEBPEQ15744 281 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 SPIN4Q56A73 249 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ZNF628Q5EBL2 1059 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 C1orf185Q5T7R7 199 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TIGD3Q6B0B8 471 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 SCIMPQ6UWF3 145 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ZYG11AQ6WRX3 759 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TDRPQ86YL5 185 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 LIX1LQ8IVB5 337 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 DMRTC2Q8IXT2 367 aaPredicted RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 ULK2Q8IYT8 1036 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 SAMD14Q8IZD0 417 aaPredicted RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 LIX1Q8N485 282 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 CCNYL1Q8N7R7 359 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ZNF675Q8TD23 568 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ERP27Q96DN0 273 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TMEM41AQ96HV5 264 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 NODALQ96S42 347 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 TIMP4Q99727 224 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 ITPAQ9BY32 194 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 MID1IP1Q9NPA3 183 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 Q9UFV3 132 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 GRID1Q9ULK0 1009 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 GPR55Q9Y2T6 319 aaPredicted RBP9.88□□□□□ -0.83
SEC13-214ENST00000476597 C15orf41Q9Y2V0 281 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 PLLPQ9Y342 182 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
SEC13-214ENST00000476597 HIVEP1P15822 2718 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 FAM47E-STBD1D6RA91 191 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 H3BQF6 201 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 PLIN3O60664 434 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 ICOSLGO75144 302 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 ANXA4P09525 319 aaPredicted RBP9.87□□□□□ -0.83
SEC13-214ENST00000476597 MYL2P10916 166 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 CAPN3P20807 821 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 PTPN6P29350 595 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 CRHR1P34998 444 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 PTGDSP41222 190 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 GSTM5P46439 218 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 MASP1P48740 699 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 NAGLUP54802 743 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 DNAJB13P59910 316 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 TLE4Q04727 773 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 BTKQ06187 659 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 CRYZQ08257 329 aaKnown RBP9.87□□□□□ -0.83
SEC13-214ENST00000476597 SNTA1Q13424 505 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 CCDC153Q494R4 210 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 NHSL2Q5HYW2 709 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 VASNQ6EMK4 673 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 SLC30A6Q6NXT4 461 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 TRIM46Q7Z4K8 759 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.87□□□□□ -0.83
SEC13-214ENST00000476597 TRIM44Q96DX7 344 aaPredicted RBP9.87□□□□□ -0.83
SEC13-214ENST00000476597 OMA1Q96E52 524 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 L2HGDHQ9H9P8 463 aa9.87□□□□□ -0.83
SEC13-214ENST00000476597 PPCSQ9HAB8 311 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms