RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MYOGP15173 224 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ATF2P15336 505 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TPH1P17752 444 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 NPR2P20594 1047 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 UBA1P22314 1058 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 UQCRC2P22695 453 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 HSD11B1P28845 292 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 GTF2E2P29084 291 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 FMO3P31513 532 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 IL15P40933 162 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ALDH3B1P43353 468 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MAGEA2P43356 314 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC11A1P49279 550 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC11A2P49281 568 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 IDH3GP51553 393 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 CCR4P51679 360 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTBP60709 375 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 RPS7P62081 194 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SNRPEP62304 92 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTA2P62736 377 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 RAP1AP62834 184 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTG1P63261 375 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTG2P63267 376 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTC1P68032 377 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ACTA1P68133 377 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TLE1Q04724 770 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ZP2Q05996 745 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 CD69Q07108 199 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SCN1BQ07699 218 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MESP2Q0VG99 397 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 IL18R1Q13478 541 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 NFIXQ14938 502 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TAF1AQ15573 450 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 USF2Q15853 346 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF630Q2M218 657 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM74A3Q4VXF1 159 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TIGD5Q53EQ6 642 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 LPCAT3Q6P1A2 487 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MED27Q6P2C8 311 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 PAQR3Q6TCH7 311 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ABHD15Q6UXT9 468 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 RBMS3Q6XE24 437 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ERN2Q76MJ5 926 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 PIWIL4Q7Z3Z4 852 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 UNC5BQ8IZJ1 945 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 GPR137CQ8N3F9 429 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 OR8D4Q8NGM9 314 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 CYGBQ8WWM9 190 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 P2RX5Q93086 422 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MR1Q95460 341 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SLAMF9Q96A28 289 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 PABPC5Q96DU9 382 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 YIPF6Q96EC8 236 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ZC3HAV1LQ96H79 300 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 RPL10LQ96L21 214 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 OR14A2Q96R54 314 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 NODALQ96S42 347 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 P2RX7Q99572 595 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 CMSS1Q9BQ75 279 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TRMOQ9BU70 441 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MRI1Q9BV20 369 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 SEMA4CQ9C0C4 833 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 HAPLN2Q9GZV7 340 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM49AQ9H0Q0 323 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 UPF3AQ9H1J1 476 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 DCSTAMPQ9H295 470 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TASP1Q9H6P5 420 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 BCAS3Q9H6U6 928 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 NOL11Q9H8H0 719 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TNFRSF12AQ9NP84 129 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 IL1RAPQ9NPH3 570 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 ZFP57Q9NU63 452 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TMEM184CQ9NVA4 438 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 STAP1Q9ULZ2 295 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 TBX20Q9UMR3 447 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 MOKQ9UQ07 419 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 POFUT2Q9Y2G5 429 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 HCFC2Q9Y5Z7 792 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM205AQ6ZU69 1335 aa5.66□□□□□ -1.5
ECHDC1-215ENST00000475319 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 TCRBV3S1A0A5B6 114 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 FITM1A5D6W6 292 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 NEMP2A6NFY4 417 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 URADA6NGE7 173 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 A6NJ64 397 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 LRRN3E7EW58 273 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 CXCL11O14625 94 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 SIGLEC5O15389 551 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 SUV39H1O43463 412 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC28A2O43868 658 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 TRIM13O60858 407 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 GGCTO75223 188 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 APOC3P02656 99 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 MPOP05164 745 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 H2AFZP0C0S5 128 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 OR56A5P0C7T3 313 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 GAAP10253 952 aa5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 HIST1H1BP16401 226 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms