RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CENPEQ02224 2701 aa16.47■□□□□ 0.23
UPF3A-203ENST00000474056 HCFC1P51610 2035 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 INTS1Q8N201 2190 aaKnown RBP16.46■□□□□ 0.23
UPF3A-203ENST00000474056 A0A1B0GVC2 190 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 AZIN1O14977 448 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 DDCP20711 480 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 AGAP20933 346 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 HTR1EP28566 365 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 C2orf80Q0P641 193 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 SLC10A1Q14973 349 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 DESI1Q6ICB0 168 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.46■□□□□ 0.23
UPF3A-203ENST00000474056 TCP10LQ8TDR4 215 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 LCORQ96JN0 433 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-203ENST00000474056 PARD6BQ9BYG5 372 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 TP63Q9H3D4 680 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-203ENST00000474056 LDAHQ9H6V9 325 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 MYNNQ9NPC7 610 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 PNPLA3Q9NST1 481 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 PRODH2Q9UF12 536 aa16.46■□□□□ 0.23
UPF3A-203ENST00000474056 ITPR2Q14571 2701 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 TRIM3O75382 744 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 NME6O75414 186 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 CHRNGP07510 517 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 ENDOUP21128 410 aaKnown RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 PRPH2P23942 346 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 MAN2A2P49641 1150 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 ZNF630Q2M218 657 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 GXYLT1Q4G148 440 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 NOXRED1Q6NXP6 359 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 Q6ZSR9 355 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 TICAM1Q8IUC6 712 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 SAMD14Q8IZD0 417 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 FAM9CQ8IZT9 166 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 SLC34A3Q8N130 599 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 MREGQ8N565 214 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 OR2T11Q8NH01 316 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 FAM76AQ8TAV0 307 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 OMA1Q96E52 524 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 HSPBAP1Q96EW2 488 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 ZNF597Q96LX8 424 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 RILPQ96NA2 401 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 SECISBP2Q96T21 854 aaKnown RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 TUBB1Q9H4B7 451 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 EXO1Q9UQ84 846 aaKnown RBP16.45■□□□□ 0.22
UPF3A-203ENST00000474056 CELSR2Q9HCU4 2923 aa16.45■□□□□ 0.22
UPF3A-203ENST00000474056 NUP214P35658 2090 aaPredicted RBP16.44■□□□□ 0.22
UPF3A-203ENST00000474056 TRGV5A0A0B4J1U4 118 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 OR14I1A6ND48 311 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 NPIPB8E9PQR5 432 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 AQP7O14520 342 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 SUSD5O60279 629 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 NPHS1O60500 1241 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 SEC22BO75396 215 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 PPM1BO75688 479 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 CLDN14O95500 239 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 CASP3P42574 277 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 PPICP45877 212 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 PLCXD2Q0VAA5 305 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 FNDC7Q5VTL7 733 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 TMEM198Q66K66 360 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 ZCCHC23Q6ZST2 131 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 OR7G2Q8NG99 324 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 HGDQ93099 445 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 SDCCAG3Q96C92 435 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 EGLN2Q96KS0 407 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 BBS4Q96RK4 519 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 NODALQ96S42 347 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 TMEM109Q9BVC6 243 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 ANGPTL4Q9BY76 406 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 SLC6A15Q9H2J7 730 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 EXO5Q9H790 373 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 MIEF1Q9NQG6 463 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 SPRR3Q9UBC9 169 aa16.44■□□□□ 0.22
UPF3A-203ENST00000474056 PCNX3Q9H6A9 2034 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 FRG2CA6NGY1 282 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 ESPNB1AK53 854 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 TMEM233B4DJY2 109 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 SLC28A1O00337 649 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 ACOX3O15254 700 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 RGS14O43566 566 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 HCN1O60741 890 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 UGT2B11O75310 529 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
UPF3A-203ENST00000474056 JUNP05412 331 aaKnown RBP16.43■□□□□ 0.22
UPF3A-203ENST00000474056 NAGAP17050 411 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 TACR1P25103 407 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 GDF1P27539 372 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 NCBP2P52298 156 aaKnown RBP eCLIP16.43■□□□□ 0.22
UPF3A-203ENST00000474056 DCAF7P61962 342 aa16.43■□□□□ 0.22
UPF3A-203ENST00000474056 RPP38P78345 283 aaKnown RBP16.43■□□□□ 0.22
UPF3A-203ENST00000474056 RNF165Q6ZSG1 346 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms