RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SETD6Q8TBK2 473 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 KIAA1524Q8TCG1 905 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 MGARPQ8TDB4 240 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 DEPDC1BQ8WUY9 529 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 VPS33AQ96AX1 596 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 MOB3AQ96BX8 217 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SIPA1Q96FS4 1042 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF558Q96NG5 402 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ACBD6Q9BR61 282 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 MRPL45Q9BRJ2 306 aaKnown RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 OVOL2Q9BRP0 275 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ELOVL4Q9GZR5 314 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SDCBP2Q9H190 292 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 LHX5Q9H2C1 402 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 CWH43Q9H720 699 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SMYD3Q9H7B4 428 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 MYNNQ9NPC7 610 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 SPG21Q9NZD8 308 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 NOCTQ9UK39 431 aaKnown RBP4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ADAM28Q9UKQ2 775 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 CDH9Q9ULB4 789 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 CCL27Q9Y4X3 112 aa4.49□□□□□ -1.69
CCDC39-202ENST00000471307 ATP8B3O60423 1300 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 SF3B1O75533 1304 aaKnown RBP eCLIP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 A0A087WUV0 522 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 hCG_1809904A0A1W2PP81 198 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 A0A1W2PPE2 198 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 A0A1W2PR64 198 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 A8MXE2 369 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 TBX10O75333 385 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 LSM8O95777 96 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 HPRP00739 348 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 ATP5BP06576 529 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 THEGLP0DJG4 465 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 LMO2P25791 158 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 MSNP26038 577 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 PIK3R1P27986 724 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 MAGEA1P43355 309 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 BRCC3P46736 316 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 HNRNPKP61978 463 aaKnown RBP eCLIP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 IRX4P78413 519 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 YWHAHQ04917 246 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 GFPT1Q06210 699 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 SMARCB1Q12824 385 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 SGCGQ13326 291 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 CUL3Q13618 768 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 MTF1Q14872 753 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 CCDC122Q5T0U0 273 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 SPOUT1Q5T280 376 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 ERMARDQ5T6L9 678 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 FUT10Q6P4F1 479 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 LCLAT1Q6UWP7 414 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 Q6ZR54 194 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 ACOT1Q86TX2 421 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 METTL4Q8N3J2 472 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 POM121L12Q8N7R1 296 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 COLGALT1Q8NBJ5 622 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 TMEM35BQ8NCS4 154 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 FAM162AQ96A26 154 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 PGAP3Q96FM1 320 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 LGMNQ99538 433 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 HNRNPABQ99729 332 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 KLHL4Q9C0H6 718 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 NOL11Q9H8H0 719 aaKnown RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 Q9H8V8 135 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 MTHFD2LQ9H903 347 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 B3GAT2Q9NPZ5 323 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 SLC24A2Q9UI40 661 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 PYCARDQ9ULZ3 195 aa4.48□□□□□ -1.69
CCDC39-202ENST00000471307 PRG3Q9Y2Y8 225 aaPredicted RBP4.48□□□□□ -1.69
CCDC39-202ENST00000471307 ADAMTS9Q9P2N4 1935 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 BTNL10A8MVZ5 291 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 C2CD4DB7Z1M9 353 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 I3L4J1 428 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TFECO14948 347 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF263O14978 683 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ADAM20O43506 726 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 H2AFZP0C0S5 128 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 PSMA3P25788 255 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 CDH5P33151 784 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 NSFP46459 744 aaKnown RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ASCL1P50553 236 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 XGP55808 180 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 WASHC5Q12768 1159 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 SLC25A30Q5SVS4 291 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TAF3Q5VWG9 929 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 CES4AQ5XG92 561 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 H2AFVQ71UI9 128 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 TMCO2Q7Z6W1 182 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 KIAA1328Q86T90 577 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ERICH1Q86X53 443 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 ZFAND4Q86XD8 727 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 PHF13Q86YI8 300 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-202ENST00000471307 FAM89BQ8N5H3 189 aa4.47□□□□□ -1.69
CCDC39-202ENST00000471307 RNF10Q8N5U6 811 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms