RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ARFIP1P53367 373 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 HYAL2Q12891 473 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GNA13Q14344 377 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GPR19Q15760 415 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ARMC4Q5T2S8 1044 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 PIP5KL1Q5T9C9 394 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 OR2A1Q8NGT9 310 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SPPL3Q8TCT6 385 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GNPDA2Q8TDQ7 276 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ABCB9Q9NP78 766 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 TRPC4Q9UBN4 977 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ASB4Q9Y574 426 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 A0A087WUU8 490 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GPR89AB7ZAQ6 455 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 FAM47E-STBD1D6RA91 191 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 CYP7B1O75881 506 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GPR89BP0CG08 455 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 NR2F6P10588 404 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 NTSP30990 170 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 GPC1P35052 558 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.355e-10■■■■■ 33.9
BRCA1-209ENST00000470026 MLF2Q15773 248 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SNAPC1Q16533 368 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 BHLHB9Q6PI77 547 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SLC36A4Q6YBV0 504 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SLC7A5P1Q8MH63 180 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SP7Q8TDD2 431 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 POF1BQ8WVV4 589 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 KCTD7Q96MP8 289 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 CAMK1GQ96NX5 476 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 TEX101Q9BY14 249 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ANKRD19PQ9H560 264 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 ACSL5Q9ULC5 683 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 PDE4DIPQ5VU43 2346 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 OTOL1A6NHN0 477 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-209ENST00000470026 HMX3A6NHT5 357 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SNTNA6NMZ2 147 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 WASHC1A8K0Z3 465 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 UBXN7O94888 489 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CSF3P09919 207 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SLC35G4P0C7Q5 338 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 MYL12AP19105 171 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SSR2P43308 183 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SCN1BQ07699 218 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 TSPAN31Q12999 210 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
BRCA1-209ENST00000470026 AGERQ15109 404 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CEBPEQ15744 281 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SLC27A4Q6P1M0 643 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 WASH2PQ6VEQ5 465 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 OR8D4Q8NGM9 314 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 RNFT2Q96EX2 444 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CNRIP1Q96F85 164 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-209ENST00000470026 C17orf62Q9BQA9 187 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SOSTQ9BQB4 213 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SARGQ9BW04 601 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 SAP130Q9H0E3 1048 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 PRDM7Q9NQW5 492 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CES1P1Q9UKY3 287 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 CARD8Q9Y2G2 431 aa12.84□□□□□ -0.35
BRCA1-209ENST00000470026 MRPS23Q9Y3D9 190 aaKnown RBP12.84□□□□□ -0.35
BRCA1-209ENST00000470026 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.35
BRCA1-209ENST00000470026 A0A1W2PR48 441 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 FAM172BPA6NC97 362 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 C4orf51C9J302 202 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 POLR1CO15160 346 aaPredicted RBP12.83□□□□□ -0.35
BRCA1-209ENST00000470026 PCCBP05166 539 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.35
BRCA1-209ENST00000470026 TSPAN19P0C672 248 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 TEAD1P28347 426 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 GABRA5P31644 462 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 CLCNKAP51800 687 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.35
BRCA1-209ENST00000470026 DUSP2Q05923 314 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 SLC9A5Q14940 896 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF730Q6ZMV8 503 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms