RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ALPPL2P10696 532 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 SAA4P35542 130 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ARHGDIAP52565 204 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 VCPP55072 806 aaKnown RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 YBEYP58557 167 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 STARD6P59095 220 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 WASHC5Q12768 1159 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 CRMP1Q14194 572 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 CD226Q15762 336 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 Q1RN00 199 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF528Q3MIS6 628 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ACSF3Q4G176 576 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 TCHHL1Q5QJ38 904 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ACER2Q5QJU3 275 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 FAM159AQ6UWV7 190 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 C1orf186Q6ZWK4 172 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 HPS6Q86YV9 775 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 HSCBQ8IWL3 235 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 SLC22A18ASQ8N1D0 253 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 NEK11Q8NG66 645 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 OR52E1Q8NGJ3 308 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 CRYGNQ8WXF5 182 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ZBED6CLQ96FA7 236 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 NSMCE2Q96MF7 247 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 NLNQ9BYT8 704 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 SIRPDQ9H106 197 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 CENPMQ9NSP4 180 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 CUTCQ9NTM9 273 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 GPR83Q9NYM4 423 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 DHRS4-AS1Q9P1J3 65 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 PURGQ9UJV8 347 aaKnown RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 IKZF3Q9UKT9 509 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 RPH3AQ9Y2J0 694 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-211ENST00000466054 KLHDC2Q9Y2U9 406 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 ABCC9O60706 1549 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 POGZQ7Z3K3 1410 aa3.27□□□□□ -1.89
LRCH3-211ENST00000466054 TMEM89A2RUT3 159 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 CFAP73A6NFT4 308 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 A8MU10 97 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 PDLIM1O00151 329 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 TYROBPO43914 113 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 SSX5O60225 188 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF253O75346 499 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 PDE5AO76074 875 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 ECDO95905 644 aaPredicted RBP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 SLC4A1P02730 911 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 SFNP31947 248 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 SGSHP51688 502 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 HMGCS2P54868 508 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 PPIAP62937 165 aaKnown RBP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 PEX6Q13608 980 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 RUNX3Q13761 415 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 GAMTQ14353 236 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 SMC1AQ14683 1233 aaKnown RBP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 CCDC40Q4G0X9 1142 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 IL23RQ5VWK5 629 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 FAM219BQ5XKK7 198 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 AMZ2Q86W34 360 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 GPD1LQ8N335 351 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 RHOXF1Q8NHV9 184 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 PHYHIPQ92561 330 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 CCDC51Q96ER9 411 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 DEFB118Q96PH6 123 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 MCCC1Q96RQ3 725 aaPredicted RBP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 TSPAN18Q96SJ8 248 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 NDUFAF3Q9BU61 184 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 XPO4Q9C0E2 1151 aaKnown RBP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.26□□□□□ -1.89
LRCH3-211ENST00000466054 ARMCX1Q9P291 453 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 AGRNO00468 2067 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 RALGAPA1Q6GYQ0 2036 aa3.26□□□□□ -1.89
LRCH3-211ENST00000466054 TRAV9-2A0A087WT02 112 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 NPIPA2E9PIF3 369 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 STK17BO94768 372 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 PRAMEF12O95522 483 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 IGHV3-9P01782 118 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 IGHG3P01860 377 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 PROS1P07225 676 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 IL10P22301 178 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 MYBPC1Q00872 1141 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 BNIP1Q12981 228 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 BTG3Q14201 252 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 LTB4RQ15722 352 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 PPP1R3AQ16821 1122 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ZSWIM7Q19AV6 140 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 MICAQ29983 383 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 AGKQ53H12 422 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ATAD3CQ5T2N8 411 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 OLFML2AQ68BL7 652 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 CCBE1Q6UXH8 406 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 VITQ6UXI7 678 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 GOLGA7Q7Z5G4 137 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 VPS36Q86VN1 386 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 GPBP1Q86WP2 473 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 ZNF397Q8NF99 534 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 DLX4Q92988 240 aaPredicted RBP3.25□□□□□ -1.89
LRCH3-211ENST00000466054 LHX4Q969G2 390 aa3.25□□□□□ -1.89
LRCH3-211ENST00000466054 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms