RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 POMZP3Q6PJE2 187 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 SIMC1Q8NDZ2 872 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 RHOXF1Q8NHV9 184 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 GATAD2BQ8WXI9 593 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 C19orf43Q9BQ61 176 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 TEX12Q9BXU0 123 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 SYNDIG1Q9H7V2 258 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ENOPH1Q9UHY7 261 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 WDR45Q9Y484 360 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ARHGEF17Q96PE2 2063 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-213ENST00000454468 EYSQ5T1H1 3165 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 CTDSP2O14595 271 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 LAMP2P13473 410 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 PSMA1P25786 263 aaKnown RBP11.29□□□□□ -0.6
SMPD4-213ENST00000454468 OR2G6Q5TZ20 316 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 SLC16A11Q8NCK7 471 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 OR5T3Q8NGG3 340 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ADAMTS16Q8TE57 1224 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 KLHL6Q8WZ60 621 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 MCHR1Q99705 422 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 HDAC8Q9BY41 377 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 INIPQ9NRY2 104 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 ANKMY1Q9P2S6 941 aa11.29□□□□□ -0.6
SMPD4-213ENST00000454468 LRRTM2O43300 516 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CDK1P06493 297 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 JUNBP17275 347 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 PCMT1P22061 227 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ATP5A1P25705 553 aaKnown RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 XCR1P46094 333 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CD300CQ08708 224 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 GRSF1Q12849 480 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 FAM111BQ6SJ93 734 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 GPR32P1Q8NGA4 272 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 MTERF3Q96E29 417 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CNRIP1Q96F85 164 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 DSN1Q9H410 356 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 PSORS1C1Q9UIG5 152 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ICKQ9UPZ9 632 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 IFT52Q9Y366 437 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SPACA6W5XKT8 324 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 A0A0C4DFX4 3053 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SMIM11AP58511 58 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SHC2P98077 582 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 DUSP6Q16828 381 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ARMC4Q5T2S8 1044 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 FAHD1Q6P587 224 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 COX18Q8N8Q8 333 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CDS1Q92903 461 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SLC35B4Q969S0 331 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 NEURL3Q96EH8 262 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 PELI2Q9HAT8 420 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SNX7Q9UNH6 387 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 A8MUA0 341 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 MFN2O95140 757 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 OXSR1O95747 527 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 MAOBP27338 520 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ADPRHP54922 357 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CAV3P56539 151 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SRFBP1Q8NEF9 429 aaKnown RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF354BQ96LW1 612 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 SPATA9Q9BWV2 254 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 TIGARQ9NQ88 270 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 APOBEC3BQ9UH17 382 aaKnown RBP11.28□□□□□ -0.6
SMPD4-213ENST00000454468 CSNK1G3Q9Y6M4 447 aa11.28□□□□□ -0.6
SMPD4-213ENST00000454468 FUOMA2VDF0 154 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 EPOPA6NHQ4 379 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 FFAR1O14842 300 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 B3GALT2O43825 422 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 CDRT1O95170 752 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 OSMP13725 252 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF12P17014 697 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 PAICSP22234 425 aaKnown RBP11.27□□□□□ -0.6
SMPD4-213ENST00000454468 ELAVL4P26378 380 aaKnown RBP11.27□□□□□ -0.6
SMPD4-213ENST00000454468 CD97P48960 835 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 TPTEP56180 551 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 REEP5Q00765 189 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 SMUG1Q53HV7 270 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 C22orf42Q6IC83 251 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms