RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 OR4C15Q8NGM1 316 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ECHDC3Q96DC8 303 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 SIGLEC11Q96RL6 698 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 KCNN2Q9H2S1 579 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HCN3Q9P1Z3 774 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 GABRPO00591 440 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 KDM4BO94953 1096 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HSD3B1P14060 373 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 GNSP15586 552 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF250P15622 560 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 KELP23276 732 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 MMP11P24347 488 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HSD3B2P26439 372 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 DSC1Q08554 894 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 BTN1A1Q13410 526 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ARHGEF6Q15052 776 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 MLIPQ5VWP3 458 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 GDPD4Q6W3E5 623 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 LINGO2Q7L985 606 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 TSEN54Q7Z6J9 526 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 KLK6Q92876 244 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 A0A0G2JMZ2 1700 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 H3BSH0 61 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 H7BY64 318 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC22A5O76082 557 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PRAP1Q96NZ9 151 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 GPATCH2Q9NW75 528 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 POLHQ9Y253 713 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 RASD1Q9Y272 281 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PARP14Q460N5 1801 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 IRGMA1A4Y4 181 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 KHDRBS3O75525 346 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 HLA-DMAP28067 261 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 STX4Q12846 297 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 MORN1Q5T089 497 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF613Q6PF04 617 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 SMPDL3AQ92484 453 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 GTPBP2Q9BX10 602 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 ENTPD4Q9Y227 616 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 EXOSC1Q9Y3B2 195 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PCM1Q15154 2024 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 C1orf226A1L170 272 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 PROM1O43490 865 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 C1SP09871 688 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 GABRB1P18505 474 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 CD79BP40259 229 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 DSG2Q14126 1118 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 GPR176Q14439 515 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 CEACAM19Q7Z692 300 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 OR51J1Q9H342 316 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 UBQLN2Q9UHD9 624 aa13.11□□□□□ -0.31
UBE2D3-210ENST00000453744 A0A0B4J293 547 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 PRODHO43272 600 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 HSF2Q03933 536 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 RNF31Q96EP0 1072 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 TREX2Q9BQ50 279 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 RANBP3Q9H6Z4 567 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 Q9Y3F1 56 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 H0YIV9 168 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 MMP20O60882 483 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 IGHA2P01877 340 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 SAGP10523 405 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ELK1P19419 428 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 CCR6P51684 374 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 MAZP56270 477 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 CDKL4Q5MAI5 379 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms