RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CCDC71Q8IV32 467 aaPredicted RBP14.01□□□□□ -0.17
CHD3-205ENST00000449744 CCDC116Q8IYX3 515 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 LILRB4Q8NHJ6 448 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 CDC26Q8NHZ8 85 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 NEIL3Q8TAT5 605 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 EPS8L3Q8TE67 593 aaKnown RBP14.01□□□□□ -0.17
CHD3-205ENST00000449744 CTHRC1Q96CG8 243 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 ZNF681Q96N22 645 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 SPOCK3Q9BQ16 436 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 TTYH2Q9BSA4 534 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 SLC6A15Q9H2J7 730 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 METTL7AQ9H8H3 244 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 SENP1Q9P0U3 644 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 SPRR3Q9UBC9 169 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 MID2Q9UJV3 735 aa14.01□□□□□ -0.17
CHD3-205ENST00000449744 C15orf38-AP3S2A0A0A6YYH1 394 aa14□□□□□ -0.17
CHD3-205ENST00000449744 UBFD1O14562 309 aaKnown RBP14□□□□□ -0.17
CHD3-205ENST00000449744 ACOX3O15254 700 aa14□□□□□ -0.17
CHD3-205ENST00000449744 CBX7O95931 251 aa14□□□□□ -0.17
CHD3-205ENST00000449744 ABCB1P08183 1280 aaPredicted RBP14□□□□□ -0.17
CHD3-205ENST00000449744 HOXD4P09016 255 aaPredicted RBP14□□□□□ -0.17
CHD3-205ENST00000449744 PCSK2P16519 638 aa14□□□□□ -0.17
CHD3-205ENST00000449744 KRT4P19013 534 aa14□□□□□ -0.17
CHD3-205ENST00000449744 ENDOUP21128 410 aaKnown RBP14□□□□□ -0.17
CHD3-205ENST00000449744 PPICP45877 212 aa14□□□□□ -0.17
CHD3-205ENST00000449744 FOXA1P55317 472 aa14□□□□□ -0.17
CHD3-205ENST00000449744 DNAJB13P59910 316 aa14□□□□□ -0.17
CHD3-205ENST00000449744 MRPS35P82673 323 aaKnown RBP14□□□□□ -0.17
CHD3-205ENST00000449744 PLCXD2Q0VAA5 305 aa14□□□□□ -0.17
CHD3-205ENST00000449744 TOMM20Q15388 145 aa14□□□□□ -0.17
CHD3-205ENST00000449744 ERCC6LQ2NKX8 1250 aa14□□□□□ -0.17
CHD3-205ENST00000449744 GALNT18Q6P9A2 607 aa14□□□□□ -0.17
CHD3-205ENST00000449744 MEX3BQ6ZN04 569 aaKnown RBP14□□□□□ -0.17
CHD3-205ENST00000449744 FRMD7Q6ZUT3 714 aa14□□□□□ -0.17
CHD3-205ENST00000449744 SH2D5Q6ZV89 423 aa14□□□□□ -0.17
CHD3-205ENST00000449744 ZNF675Q8TD23 568 aa14□□□□□ -0.17
CHD3-205ENST00000449744 OMA1Q96E52 524 aa14□□□□□ -0.17
CHD3-205ENST00000449744 RRAGDQ9NQL2 400 aaPredicted RBP14□□□□□ -0.17
CHD3-205ENST00000449744 SLC35C2Q9NQQ7 365 aa14□□□□□ -0.17
CHD3-205ENST00000449744 SIRT5Q9NXA8 310 aa14□□□□□ -0.17
CHD3-205ENST00000449744 CACNA1CQ13936 2221 aa14□□□□□ -0.17
CHD3-205ENST00000449744 NINQ8N4C6 2090 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 NKX2-6A6NCS4 301 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 FAM47E-STBD1D6RA91 191 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 GNB5O14775 395 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 GLI4P10075 376 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 DRD5P21918 477 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 ELAVL4P26378 380 aaKnown RBP13.99□□□□□ -0.17
CHD3-205ENST00000449744 SSTR2P30874 369 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 MPIP34949 423 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 ZNF763Q0D2J5 394 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 C2orf80Q0P641 193 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 DUSP8Q13202 625 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 ZNF628Q5EBL2 1059 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 FAM9CQ8IZT9 166 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 C4orf33Q8N1A6 199 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 SIMC1Q8NDZ2 872 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 OR1J4Q8NGS1 313 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 OR9A2Q8NGT5 310 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 KAT2AQ92830 837 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 ERP27Q96DN0 273 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 TMEM41AQ96HV5 264 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 GNRHR2Q96P88 292 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 BBS4Q96RK4 519 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 TRIM8Q9BZR9 551 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 UCK2Q9BZX2 261 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 IQCGQ9H095 443 aaKnown RBP13.99□□□□□ -0.17
CHD3-205ENST00000449744 ENKD1Q9H0I2 346 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 MIEF1Q9NQG6 463 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 OXSMQ9NWU1 459 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 EHD3Q9NZN3 535 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 KLRF1Q9NZS2 232 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 C15orf41Q9Y2V0 281 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 PCDHGB3Q9Y5G1 929 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 FAM215AQ9Y5M1 114 aa13.99□□□□□ -0.17
CHD3-205ENST00000449744 FRG2CA6NGY1 282 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 REM1O75628 298 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 DDCP20711 480 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 SOX18P35713 384 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 KRT20P35900 424 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 ZFP36L2P47974 494 aaKnown RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 EMDP50402 254 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 CDK9P50750 372 aaKnown RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 LIPMQ5VYY2 423 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 RTL6Q6ICC9 239 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 SLC30A6Q6NXT4 461 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 HGDQ93099 445 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 C11orf24Q96F05 449 aaPredicted RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 C12orf65Q9H3J6 166 aaKnown RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 POLR3HQ9Y535 204 aaPredicted RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 CELSR2Q9HCU4 2923 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 PHF3Q92576 2039 aaKnown RBP13.98□□□□□ -0.17
CHD3-205ENST00000449744 CRYBG3Q68DQ2 2970 aa13.98□□□□□ -0.17
CHD3-205ENST00000449744 PKDREJQ9NTG1 2253 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TO15178 435 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms