RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ACTR6Q9GZN1 396 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 HS3ST2Q9Y278 367 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 USP3Q9Y6I4 520 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 EI24O14681 340 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TP73O15350 636 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 S100A6P06703 90 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PRLHRP49683 370 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 RPP30P78346 268 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 KCTD19Q17RG1 926 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 LRIT3Q3SXY7 679 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PERM1Q5SV97 790 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 DLK2Q6UY11 383 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 MMACHCQ9Y4U1 282 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TEX13DA0A0J9YY54 714 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 D6RAR5 112 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 RNASET2O00584 256 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ATF6P18850 670 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ADAMTSL4Q6UY14 1074 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PCED1AQ9H1Q7 454 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CCM2LQ9NUG4 571 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ICKQ9UPZ9 632 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 STRCQ7RTU9 1775 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 DOCK1Q14185 1865 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PRAMEF33A0A0G2JMD5 474 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 A0A0G2JMP0 313 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PRAMEF10O60809 474 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 RPP14O95059 124 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 MAGEA2P43356 314 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SLC3A1Q07837 685 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CHRFAM7AQ494W8 412 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SLC2A7Q6PXP3 512 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 HS3ST5Q8IZT8 346 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SLC43A2Q8N370 569 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CCDC71LQ8N9Z2 235 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 OR4M2Q8NGB6 313 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 C16orf78Q8WTQ4 265 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 XKR8Q9H6D3 395 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CD40LGP29965 261 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 GNMTQ14749 295 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 MCATQ8IVS2 390 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 LSMEM2Q8N112 164 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZFP3Q96NJ6 502 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 GPN2Q9H9Y4 310 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 LRIT1Q9P2V4 623 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF175Q9Y473 711 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TNFRSF10CO14798 259 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CCNKO75909 580 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TSFMP43897 325 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 RAB11BQ15907 218 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM107Q6UX40 140 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CHPT1Q8WUD6 406 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CRYGNQ8WXF5 182 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 C12orf65Q9H3J6 166 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 AIG1Q9NVV5 245 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 FGF4P08620 206 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ACPPP15309 386 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 IL32P24001 234 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 MSX2P35548 267 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SHC2P98077 582 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 RANBP10Q6VN20 620 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 UTP23Q9BRU9 249 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZBP1Q9H171 429 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ABCB9Q9NP78 766 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 GJD2Q9UKL4 321 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 OAZ3Q9UMX2 235 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 LRRN3E7EW58 273 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 BEST1O76090 585 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 GKP32189 559 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TPTEP56180 551 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 DEFB103AP81534 67 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 DCDP81605 110 aaKnown RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ATP6AP1Q15904 470 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 LRRN3Q9H3W5 708 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 COL22A1Q8NFW1 1626 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 A0A1W2PPH5 198 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 HTRA2O43464 458 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 CDK2P24941 298 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PDHA2P29803 388 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZBED5Q49AG3 693 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TXNRD3NBQ6F5E7 133 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 NAPRTQ6XQN6 538 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF615Q8N8J6 731 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 TBC1D20Q96BZ9 403 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 BIRC7Q96CA5 298 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 PRR11Q96HE9 360 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-204ENST00000446349 ALOXE3Q9BYJ1 711 aa8.12□□□□□ -1.11
PTPN3-204ENST00000446349 SNTG1Q9NSN8 517 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms