RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 UBTD2Q8WUN7 234 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 OSBPL11Q9BXB4 747 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 ACTR8Q9H981 624 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 CAB39LQ9H9S4 337 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 ASIC3Q9UHC3 531 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 MRPS18CQ9Y3D5 142 aaKnown RBP13.03□□□□□ -0.32
HMGN1-208ENST00000443046 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 CR1P17927 2039 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 RNF212BA8MTL3 300 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 TP73O15350 636 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-208ENST00000443046 SRD5A2P31213 254 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 GMPRP36959 345 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 MGAT2Q10469 447 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 TNK1Q13470 666 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 CUL3Q13618 768 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 BCL2A1Q16548 175 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 IFNEQ86WN2 208 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 GRAMD2AQ8IUY3 354 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 PGM2Q96G03 612 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 MTERF1Q99551 399 aaKnown RBP13.02□□□□□ -0.33
HMGN1-208ENST00000443046 CENPKQ9BS16 269 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 SMYD2Q9NRG4 433 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 NSMCE4AQ9NXX6 385 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 TAS2R10Q9NYW0 307 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.33
HMGN1-208ENST00000443046 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 B4DXG7 233 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 H0YIV9 168 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 C16orf97H3BN30 126 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 K7EPI3 171 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 PHGDHO43175 533 aaKnown RBP13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ZIC3O60481 467 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 UGT2B11O75310 529 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■■■□ 21.6
HMGN1-208ENST00000443046 KRT15P19012 456 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 SLC12A2P55011 1212 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-208ENST00000443046 KBTBD12Q3ZCT8 623 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 OR2A2Q6IF42 318 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 HMBOX1Q6NT76 420 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 AAGABQ6PD74 315 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF550Q7Z398 422 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ISCA2Q86U28 154 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ANKMY2Q8IV38 441 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 CAVIN3Q969G5 261 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 OMA1Q96E52 524 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 FAM111AQ96PZ2 611 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 OPN3Q9H1Y3 402 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-208ENST00000443046 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 HEY2Q9UBP5 337 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF639Q9UID6 485 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 PCDHGA11Q9Y5H2 935 aa13.01□□□□□ -0.33
HMGN1-208ENST00000443046 FRG2CA6NGY1 282 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 E7ESA3 106 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 ACOX3O15254 700 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 EMC8O43402 210 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 KLF4O43474 513 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 PIAS1O75925 651 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 THBDP07204 575 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 CD8BP10966 210 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 NID1P14543 1247 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 POU2F1P14859 743 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 PIK3R1P27986 724 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 XKP51811 444 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 CLDN15P56746 228 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 B3GALT5-AS1P59052 145 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 HMGCS1Q01581 520 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 DMTNQ08495 405 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 FASTKD3Q14CZ7 662 aaKnown RBP13□□□□□ -0.33
HMGN1-208ENST00000443046 GUSBP1Q15486 140 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 LIPJQ5W064 366 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 CYP20A1Q6UW02 462 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 FBXO36Q8NEA4 188 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 OR4K14Q8NGD5 310 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 RDH11Q8TC12 318 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 RNF138Q8WVD3 245 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 TSPAN17Q96FV3 270 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 LCORQ96JN0 433 aaPredicted RBP13□□□□□ -0.33
HMGN1-208ENST00000443046 ATOH8Q96SQ7 321 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 GPR22Q99680 433 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 ITPAQ9BY32 194 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 DDX47Q9H0S4 455 aaKnown RBP13□□□□□ -0.33
HMGN1-208ENST00000443046 NUDT4Q9NZJ9 180 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 KLRF1Q9NZS2 232 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 OPTCQ9UBM4 332 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 FBXL2Q9UKC9 423 aa13□□□□□ -0.33
HMGN1-208ENST00000443046 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 PRAMEF25A6NGN4 478 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms