RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DLG1Q12959 904 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 DUSP8Q13202 625 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 PCBP2Q15366 365 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS50-204ENST00000438395 CEBPEQ15744 281 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 SGO1Q5FBB7 561 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 CCNYL2Q5T2Q4 361 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FRG2Q64ET8 278 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 C8orf74Q6P047 294 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 SCIMPQ6UWF3 145 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 DGAT2L6Q6ZPD8 337 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 CENPLQ8N0S6 344 aaPredicted RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 PTGR2Q8N8N7 351 aaPredicted RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 OR7G1Q8NGA0 311 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FBXO25Q8TCJ0 367 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 NRGNQ92686 78 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FRG2BQ96QU4 278 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 TRIB1Q96RU8 372 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FOXC2Q99958 501 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 YIPF4Q9BSR8 244 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FAIM2Q9BWQ8 316 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 NOL11Q9H8H0 719 aaKnown RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 SH2D2AQ9NP31 389 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 CCM2LQ9NUG4 571 aaPredicted RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 NMRK1Q9NWW6 199 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 KLRF1Q9NZS2 232 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 ZNF629Q9UEG4 869 aaPredicted RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 BCAP29Q9UHQ4 241 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 ST6GALNAC2Q9UJ37 374 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 PSME2Q9UL46 239 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 PLEKHA6Q9Y2H5 1048 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 C15orf41Q9Y2V0 281 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 RNF11Q9Y3C5 154 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 ASB4Q9Y574 426 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 NPFFR2Q9Y5X5 522 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 NIPBLQ6KC79 2804 aaeCLIP7.11□□□□□ -1.27
VPS50-204ENST00000438395 A6NNC1 897 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 H0Y3Z8 333 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SYT5O00445 386 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ACOX3O15254 700 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 TRIM3O75382 744 aaPredicted RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 ERN1O75460 977 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 ERAL1O75616 437 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 ALX3O95076 343 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 KLHL2O95198 593 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SIX3O95343 332 aaPredicted RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 ACSL3O95573 720 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ESRRBO95718 433 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 EPPINO95925 133 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OTCP00480 354 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 C1QAP02745 245 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 KLK1P06870 262 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 RBP1P09455 135 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 CYP4B1P13584 511 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 MTHFD2P13995 350 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 CPMP14384 443 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 PORP16435 677 aaPredicted RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 TACR1P25103 407 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 NOS3P29474 1203 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OPRM1P35372 400 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 KRT20P35900 424 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 CKAP4Q07065 602 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 CRYZQ08257 329 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 KEAP1Q14145 624 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 NNATQ16517 81 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 TSNAXIP1Q2TAA8 658 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 BICRALQ6AI39 1079 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 MRM1Q6IN84 353 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 ENPP6Q6UWR7 440 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ANGPTL8Q6UXH0 198 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 CAMKMTQ7Z624 323 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 LIX1LQ8IVB5 337 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 PRR22Q8IZ63 422 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 L3MBTL4Q8NA19 623 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 RELL2Q8NC24 303 aaPredicted RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 C17orf47Q8NEP4 570 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 TNIP2Q8NFZ5 429 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OR1J4Q8NGS1 313 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OR14L1PQ8NHC6 308 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SPPL2AQ8TCT8 520 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ABTB1Q969K4 478 aaPredicted RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 KLHL29Q96CT2 875 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 PHF21BQ96EK2 531 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 TIMP4Q99727 224 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OSBPL11Q9BXB4 747 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ANGPTL4Q9BY76 406 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 MRPL1Q9BYD6 325 aaKnown RBP7.1□□□□□ -1.27
VPS50-204ENST00000438395 BRINP2Q9C0B6 783 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 OR10A5Q9H207 317 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 RASSF1Q9NS23 344 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 GIMAP4Q9NUV9 329 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SENP1Q9P0U3 644 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ADAM29Q9UKF5 820 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SNX6Q9UNH7 406 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SLC12A4Q9UP95 1085 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 SLC6A5Q9Y345 797 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 ZNF780BQ9Y6R6 833 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 MED13LQ71F56 2210 aa7.1□□□□□ -1.27
VPS50-204ENST00000438395 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms