RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GIT2Q14161 759 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 FUT11Q495W5 492 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF789Q5FWF6 425 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 C12orf60Q5U649 245 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 AGAP6Q5VW22 663 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 LIPKQ5VXJ0 399 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 REP15Q6BDI9 236 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RAET1GQ6H3X3 334 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 NEPROQ6NW34 567 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 IRGCQ6NXR0 463 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 B3GLCTQ6Y288 498 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TAF8Q7Z7C8 310 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 WDR49Q8IV35 697 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TEX9Q8N6V9 391 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 MRPL43Q8N983 215 aaKnown RBP2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TRPV3Q8NET8 790 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 CCDC110Q8TBZ0 833 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 SPATA18Q8TC71 538 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 GPR148Q8TDV2 347 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 UBTD2Q8WUN7 234 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 LIPHQ8WWY8 451 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 SEPT8Q92599 483 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RBM18Q96H35 190 aaKnown RBP2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TSSK2Q96PF2 358 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 EBF4Q9BQW3 602 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 JPH2Q9BR39 696 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-205ENST00000433888 CCSER1Q9C0I3 900 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RAB17Q9H0T7 212 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 COQ10BQ9H8M1 238 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 ACTR8Q9H981 624 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 YAE1D1Q9NRH1 226 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 PIGVQ9NUD9 493 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 COMMD8Q9NX08 183 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 DBF4Q9UBU7 674 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-205ENST00000433888 IL20RAQ9UHF4 553 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 ETV7Q9Y603 341 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 GTF3C1Q12789 2109 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SH3PXD2BA1X283 911 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TCP11X1B4DZS4 312 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 LRP3O75074 770 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 PEX11AO75192 247 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TRIM16O95361 564 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FGF19O95750 216 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 AK1P00568 194 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ODC1P11926 461 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 CD1EP15812 388 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 MDKP21741 143 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 GPX3P22352 226 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 MARCKSP29966 332 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 PPP2R1AP30153 589 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 OR1D2P34982 312 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 IER3P46695 156 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TRPC1P48995 793 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 MTTPP55157 894 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 PEX3P56589 373 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 KCNK10P57789 538 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SLC34A1Q06495 639 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ARHGAP1Q07960 439 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 CETN1Q12798 172 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 BTG3Q14201 252 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 KIAA0040Q15053 153 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 HSP90AA5PQ58FG0 334 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ARMCX4Q5H9R4 360 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SLC25A24Q6NUK1 477 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 PHLDB2Q86SQ0 1253 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 AMZ2Q86W34 360 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 CCDC71Q8IV32 467 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TBC1D21Q8IYX1 336 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FBXW8Q8N3Y1 598 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 OR6F1Q8NGZ6 308 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SLC26A7Q8TE54 656 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 RNF138Q8WVD3 245 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SMPDL3AQ92484 453 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FCGR1BQ92637 280 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FRAT1Q92837 279 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ULK4Q96C45 1275 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 BPIFA2Q96DR5 249 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ZBED6CLQ96FA7 236 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 NAP1L3Q99457 506 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FAM213AQ9BRX8 229 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 THUMPD2Q9BTF0 503 aaKnown RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FUNDC2Q9BWH2 189 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 CARD6Q9BX69 1037 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TMEM245Q9H330 911 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF665Q9H7R5 613 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 MAGEF1Q9HAY2 307 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 SLC35D1Q9NTN3 355 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 AATFQ9NY61 560 aaKnown RBP eCLIP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TMOD2Q9NZR1 351 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 CHRNA9Q9UGM1 479 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 FOXA2Q9Y261 457 aaPredicted RBP2.32□□□□□ -2.04
PTPN4-205ENST00000433888 ATP6V0A2Q9Y487 856 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 OR1A2Q9Y585 309 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 PFASO15067 1338 aa2.32□□□□□ -2.04
PTPN4-205ENST00000433888 TRBV2A0A0J9YWF9 115 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 EPOPA6NHQ4 379 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF724A8MTY0 619 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 SAP18O00422 153 aaKnown RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 RASGRF2O14827 1237 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms