RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 NAGAP17050 411 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 CNTFP26441 200 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 NEK2P51955 445 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 PLCXD2Q0VAA5 305 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 GAB1Q13480 694 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 SCIMPQ6UWF3 145 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 NUP54Q7Z3B4 507 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 ADGRE4PQ86SQ3 457 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 SIMC1Q8NDZ2 872 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 HGDQ93099 445 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 OMA1Q96E52 524 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 PERPQ96FX8 193 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 CCL19Q99731 98 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 G6PC3Q9BUM1 346 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 OR2B2Q9GZK3 357 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 EHD3Q9NZN3 535 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 CLCF1Q9UBD9 225 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 BCAP29Q9UHQ4 241 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 EXO1Q9UQ84 846 aaKnown RBP16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 PRAMEF25A6NGN4 478 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 LRRC14BA6NHZ5 514 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 SYCE1LA8MT33 242 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 CTIFO43310 598 aaKnown RBP16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 CBR3O75828 277 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 SMNDC1O75940 238 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 RHOXF2BP0C7M4 288 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 MTHFD2P13995 350 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 CPMP14384 443 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PORP16435 677 aaPredicted RBP16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 CRABP2P29373 138 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PTGDSP41222 190 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PIK3CGP48736 1102 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 STARP49675 285 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 EEF1A1P68104 462 aaKnown RBP16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PPP2R2BQ00005 443 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 SNTA1Q13424 505 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PFKFB4Q16877 469 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 GRTP1Q5TC63 336 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 EEF1A1P5Q5VTE0 462 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 TMEM81Q6P7N7 255 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 IFNEQ86WN2 208 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 NXNL1Q96CM4 212 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 PIK3IP1Q96FE7 263 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 UCN2Q96RP3 112 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 ITPAQ9BY32 194 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 BRINP2Q9C0B6 783 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 KLHL28Q9NXS3 571 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 TAS2R10Q9NYW0 307 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
UPK3BP1-201ENST00000428678 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 A0A1W2PNV4 684 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 TRIM64A6NGJ6 449 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 TRIM64BA6NI03 449 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 INAFM1C9JVW0 142 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 FOXE1O00358 373 aaPredicted RBP16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 PLOD2O00469 737 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 SIAH2O43255 324 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 UGDHO60701 494 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 UGT2B11O75310 529 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 TNFSF13O75888 250 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 S1PR1P21453 382 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 FPR1P21462 350 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 CHMP24386 653 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 ARL1P40616 181 aaPredicted RBP16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 GFRA1P56159 465 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 FAM27E3Q08E93 113 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 CBLBQ13191 982 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 EXOSC7Q15024 291 aaKnown RBP16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 ACKR1Q16570 336 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 AAGABQ6PD74 315 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 PRSS57Q6UWY2 283 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 C3orf62Q6ZUJ4 267 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 PPM1NQ8N819 430 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 WDSUB1Q8N9V3 476 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 WDR20Q8TBZ3 569 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 KCTD4Q8WVF5 259 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 LCORQ96JN0 433 aaPredicted RBP16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 WFIKKN1Q96NZ8 548 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 FAM111AQ96PZ2 611 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 SERPINI1Q99574 410 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 MED18Q9BUE0 208 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 REPIN1Q9BWE0 567 aaKnown RBP16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 IPPKQ9H8X2 491 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 CFL2Q9Y281 166 aa16.61■□□□□ 0.25
UPK3BP1-201ENST00000428678 USF3Q68DE3 2245 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 DEFB108AA8MXU0 73 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 MSTNO14793 375 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 ACOX3O15254 700 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 SEMA3DO95025 777 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 KLK1P06870 262 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 TCEA1P23193 301 aaKnown RBP16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 LHX2P50458 406 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 GTF2H2Q13888 395 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 GTF2H2CQ6P1K8 395 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 FAM111BQ6SJ93 734 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 P4HA3Q7Z4N8 544 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 GOLGA7Q7Z5G4 137 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 CREG2Q8IUH2 290 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 CNEP1R1Q8N9A8 125 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms