RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CLDN9O95484 217 aa15.06■□□□□ 0
VARS-216ENST00000428445 HRGP04196 525 aa15.06■□□□□ 0
VARS-216ENST00000428445 PORP16435 677 aaPredicted RBP15.06■□□□□ 0
VARS-216ENST00000428445 KRT15P19012 456 aa15.06■□□□□ 0
VARS-216ENST00000428445 CD53P19397 219 aa15.06■□□□□ 0
VARS-216ENST00000428445 HOXC12P31275 282 aa15.06■□□□□ 0
VARS-216ENST00000428445 OPRM1P35372 400 aa15.06■□□□□ 0
VARS-216ENST00000428445 SF3B4Q15427 424 aaKnown RBP eCLIP15.06■□□□□ 01e-8■■■■■ 36.7
VARS-216ENST00000428445 LTB4RQ15722 352 aa15.06■□□□□ 0
VARS-216ENST00000428445 CCNYL2Q5T2Q4 361 aa15.06■□□□□ 0
VARS-216ENST00000428445 C10orf62Q5T681 223 aaPredicted RBP15.06■□□□□ 0
VARS-216ENST00000428445 KIF18BQ86Y91 864 aa15.06■□□□□ 0
VARS-216ENST00000428445 GCNT2Q8N0V5 402 aa15.06■□□□□ 0
VARS-216ENST00000428445 PTGR2Q8N8N7 351 aaPredicted RBP15.06■□□□□ 0
VARS-216ENST00000428445 ATP6V1E2Q96A05 226 aa15.06■□□□□ 0
VARS-216ENST00000428445 INTS12Q96CB8 462 aaKnown RBP15.06■□□□□ 0
VARS-216ENST00000428445 OMA1Q96E52 524 aa15.06■□□□□ 0
VARS-216ENST00000428445 SECISBP2Q96T21 854 aaKnown RBP15.06■□□□□ 0
VARS-216ENST00000428445 ANKRA2Q9H9E1 313 aa15.06■□□□□ 0
VARS-216ENST00000428445 GALNT8Q9NY28 637 aa15.06■□□□□ 0
VARS-216ENST00000428445 CES1P1Q9UKY3 287 aa15.06■□□□□ 0
VARS-216ENST00000428445 EDARQ9UNE0 448 aa15.06■□□□□ 0
VARS-216ENST00000428445 C17orf51A8MQB3 221 aa15.05■□□□□ -0
VARS-216ENST00000428445 PPP6CO00743 305 aa15.05■□□□□ -0
VARS-216ENST00000428445 UGT2B11O75310 529 aa15.05■□□□□ -0
VARS-216ENST00000428445 ERAL1O75616 437 aaKnown RBP15.05■□□□□ -0
VARS-216ENST00000428445 KLHL2O95198 593 aa15.05■□□□□ -0
VARS-216ENST00000428445 CYP4B1P13584 511 aa15.05■□□□□ -0
VARS-216ENST00000428445 FOSL1P15407 271 aa15.05■□□□□ -0
VARS-216ENST00000428445 TSPAN8P19075 237 aa15.05■□□□□ -0
VARS-216ENST00000428445 TMED10P49755 219 aaKnown RBP15.05■□□□□ -0
VARS-216ENST00000428445 GUCY2DQ02846 1103 aa15.05■□□□□ -0
VARS-216ENST00000428445 PRICKLE4Q2TBC4 344 aa15.05■□□□□ -0
VARS-216ENST00000428445 TRMT12Q53H54 448 aaKnown RBP15.05■□□□□ -0
VARS-216ENST00000428445 KLC3Q6P597 504 aa15.05■□□□□ -0
VARS-216ENST00000428445 TRIM42Q8IWZ5 723 aa15.05■□□□□ -0
VARS-216ENST00000428445 WDSUB1Q8N9V3 476 aa15.05■□□□□ -0
VARS-216ENST00000428445 OR7G1Q8NGA0 311 aa15.05■□□□□ -0
VARS-216ENST00000428445 ZPLD1Q8TCW7 415 aa15.05■□□□□ -0
VARS-216ENST00000428445 SERPINI1Q99574 410 aa15.05■□□□□ -0
VARS-216ENST00000428445 G6PC3Q9BUM1 346 aa15.05■□□□□ -0
VARS-216ENST00000428445 VPS11Q9H270 941 aa15.05■□□□□ -0
VARS-216ENST00000428445 ZBTB26Q9HCK0 441 aa15.05■□□□□ -0
VARS-216ENST00000428445 MAT2BQ9NZL9 334 aa15.05■□□□□ -0
VARS-216ENST00000428445 PLLPQ9Y342 182 aa15.05■□□□□ -0
VARS-216ENST00000428445 PCNX3Q9H6A9 2034 aa15.04■□□□□ -0
VARS-216ENST00000428445 H0Y3Z8 333 aa15.04■□□□□ -0
VARS-216ENST00000428445 SNPHO15079 494 aa15.04■□□□□ -0
VARS-216ENST00000428445 CDH16O75309 829 aa15.04■□□□□ -0
VARS-216ENST00000428445 CCNG1P51959 295 aa15.04■□□□□ -0
VARS-216ENST00000428445 DCAF7P61962 342 aa15.04■□□□□ -0
VARS-216ENST00000428445 RCAN2Q14206 197 aa15.04■□□□□ -0
VARS-216ENST00000428445 TECRLQ5HYJ1 363 aa15.04■□□□□ -0
VARS-216ENST00000428445 TTC19Q6DKK2 380 aaPredicted RBP15.04■□□□□ -0
VARS-216ENST00000428445 OR5M10Q6IEU7 315 aa15.04■□□□□ -0
VARS-216ENST00000428445 NUP54Q7Z3B4 507 aa15.04■□□□□ -0
VARS-216ENST00000428445 OR52R1Q8NGF1 315 aa15.04■□□□□ -0
VARS-216ENST00000428445 OR14L1PQ8NHC6 308 aa15.04■□□□□ -0
VARS-216ENST00000428445 OSBPL11Q9BXB4 747 aa15.04■□□□□ -0
VARS-216ENST00000428445 KLRF1Q9NZS2 232 aa15.04■□□□□ -0
VARS-216ENST00000428445 PCDHA9Q9Y5H5 950 aa15.04■□□□□ -0
VARS-216ENST00000428445 ESYT3A0FGR9 886 aa15.03■□□□□ -0
VARS-216ENST00000428445 SH3D21A4FU49 640 aa15.03■□□□□ -0
VARS-216ENST00000428445 B4DXG7 233 aa15.03■□□□□ -0
VARS-216ENST00000428445 ERN1O75460 977 aaKnown RBP15.03■□□□□ -0
VARS-216ENST00000428445 SEMA3DO95025 777 aa15.03■□□□□ -0
VARS-216ENST00000428445 RCBTB2O95199 551 aa15.03■□□□□ -0
VARS-216ENST00000428445 CBX7O95931 251 aa15.03■□□□□ -0
VARS-216ENST00000428445 IL18BPO95998 194 aa15.03■□□□□ -0
VARS-216ENST00000428445 ACTL6AO96019 429 aa15.03■□□□□ -0
VARS-216ENST00000428445 ALDOAP04075 364 aaKnown RBP15.03■□□□□ -0
VARS-216ENST00000428445 CPN1P15169 458 aa15.03■□□□□ -0
VARS-216ENST00000428445 PCSK2P16519 638 aa15.03■□□□□ -0
VARS-216ENST00000428445 TYK2P29597 1187 aa15.03■□□□□ -0
VARS-216ENST00000428445 ADSLP30566 484 aaPredicted RBP15.03■□□□□ -0
VARS-216ENST00000428445 CPA2P48052 419 aa15.03■□□□□ -0
VARS-216ENST00000428445 MAPK12P53778 367 aa15.03■□□□□ -0
VARS-216ENST00000428445 RPP38P78345 283 aaKnown RBP15.03■□□□□ -0
VARS-216ENST00000428445 NKX6-1P78426 367 aaPredicted RBP15.03■□□□□ -0
VARS-216ENST00000428445 MRPS35P82673 323 aaKnown RBP15.03■□□□□ -0
VARS-216ENST00000428445 SORDQ00796 357 aa15.03■□□□□ -0
VARS-216ENST00000428445 SLC7A5Q01650 507 aa15.03■□□□□ -0
VARS-216ENST00000428445 PLCXD2Q0VAA5 305 aa15.03■□□□□ -0
VARS-216ENST00000428445 MAP4K2Q12851 820 aa15.03■□□□□ -0
VARS-216ENST00000428445 TRAF3Q13114 568 aa15.03■□□□□ -0
VARS-216ENST00000428445 C6orf163Q5TEZ5 329 aa15.03■□□□□ -0
VARS-216ENST00000428445 FRG2Q64ET8 278 aa15.03■□□□□ -0
VARS-216ENST00000428445 SLC48A1Q6P1K1 146 aa15.03■□□□□ -0
VARS-216ENST00000428445 CIARTQ8N365 385 aaPredicted RBP15.03■□□□□ -0
VARS-216ENST00000428445 METTL4Q8N3J2 472 aa15.03■□□□□ -0
VARS-216ENST00000428445 C17orf47Q8NEP4 570 aa15.03■□□□□ -0
VARS-216ENST00000428445 OR4F6Q8NGB9 312 aa15.03■□□□□ -0
VARS-216ENST00000428445 TM4SF18Q96CE8 201 aa15.03■□□□□ -0
VARS-216ENST00000428445 LCORQ96JN0 433 aaPredicted RBP15.03■□□□□ -0
VARS-216ENST00000428445 C18orf12Q96KH6 178 aa15.03■□□□□ -0
VARS-216ENST00000428445 FRG2BQ96QU4 278 aa15.03■□□□□ -0
VARS-216ENST00000428445 HBEGFQ99075 208 aa15.03■□□□□ -0
VARS-216ENST00000428445 NEUROD4Q9HD90 331 aa15.03■□□□□ -0
VARS-216ENST00000428445 AHSPQ9NZD4 102 aa15.03■□□□□ -0
VARS-216ENST00000428445 C6orf203Q9P0P8 240 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms