RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR2A4O95047 310 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 WISP3O95389 354 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 NFATC1O95644 943 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTBP3O95758 552 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ICAM1P05362 532 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SERPIND1P05546 499 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 THP07101 528 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 THBS1P07996 1170 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CELA2BP08218 269 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 DRD2P14416 443 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CSF2RAP15509 400 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 EPCAMP16422 314 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ITGB5P18084 799 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARF4P18085 180 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 HLA-DPA1P20036 260 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PRPS1L1P21108 318 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 GSTM3P21266 225 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 C5AR1P21730 350 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 HOXC8P31273 242 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCGF2P35227 344 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPL3P39023 403 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RBM34P42696 430 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCP4P48539 62 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRISP1P54107 249 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 VSX2P58304 361 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAC1P63000 192 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 BLOC1S1P78537 153 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MAT1AQ00266 395 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SPIBQ01892 262 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MXD1Q05195 221 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRYZQ08257 329 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 IL10RBQ08334 325 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SNTB2Q13425 540 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 HTR4Q13639 388 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 HLXQ14774 488 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SGCAQ16586 387 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 NKG7Q16617 165 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 DUOXA1Q1HG43 343 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SYTL3Q4VX76 610 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXO48Q5FWF7 155 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RNASE10Q5GAN6 216 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2B11Q5JQS5 317 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 THEM4Q5T1C6 240 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANXA8L1Q5VT79 327 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 LIPKQ5VXJ0 399 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 C22orf42Q6IC83 251 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 H3F3CQ6NXT2 135 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 INTS5Q6P9B9 1019 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRTC1Q6UUV9 634 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 IL27RAQ6UWB1 636 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CEP68Q76N32 757 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAS1R3Q7RTX0 852 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 KANSL1Q7Z3B3 1105 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 DPPA2Q7Z7J5 298 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANKRD46Q86W74 232 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRRC56Q8IYG6 542 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 GJD3Q8N144 294 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 STK40Q8N2I9 435 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM86B1Q8N7N1 296 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCSK9Q8NBP7 692 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM98AQ8NCA5 519 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 DNAAF1Q8NEP3 725 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 NEIL3Q8TAT5 605 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 STOML3Q8TAV4 291 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 GNPDA2Q8TDQ7 276 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CCDC107Q8WV48 283 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 BSNDQ8WZ55 320 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CNOT9Q92600 299 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 EDEM1Q92611 657 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MRPS31Q92665 395 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 EDAQ92838 391 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 EXT2Q93063 718 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 WNT8BQ93098 351 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTPBP3Q969Y2 492 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 C3orf49Q96BT1 292 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PABPC5Q96DU9 382 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 C7orf34Q96L11 122 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CXorf58Q96LI9 332 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 NOL4LQ96MY1 436 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2A7Q96R45 310 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATOH8Q96SQ7 321 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCYT2Q99447 389 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FEVQ99581 238 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATF6BQ99941 703 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MRIQ9BWK5 157 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 C20orf85Q9H1P6 137 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TUBB1Q9H4B7 451 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TUBA4BQ9H853 241 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC25A19Q9HC21 320 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MYOZ1Q9NP98 299 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PDLIM7Q9NR12 457 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CTPS2Q9NRF8 586 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TEX10Q9NXF1 929 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RASL12Q9NYN1 266 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF226Q9NYT6 803 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAS2R8Q9NYW2 309 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ABRACLQ9P1F3 81 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 UPB1Q9UBR1 384 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms