RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SNAP29O95721 258 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 CKMT1AP12532 417 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 TNFRSF1BP20333 461 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 NT5EP21589 574 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 MAP3K8P41279 467 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 CHN2P52757 468 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 EPS8Q12929 822 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 PPP1R8Q12972 351 aaKnown RBP14.21□□□□□ -0.13
ACTB-204ENST00000425660 SLC13A2Q13183 592 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 ANGPT1Q15389 498 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SYT16Q17RD7 645 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 PROX2Q3B8N5 592 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 ZNF605Q86T29 641 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 GPR135Q8IZ08 494 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 EID2Q8N6I1 236 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 ADAMTS15Q8TE58 950 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SLC35A4Q96G79 324 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 ZNF354BQ96LW1 612 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 DPYSL5Q9BPU6 564 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 AMBRA1Q9C0C7 1298 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SLC38A1Q9H2H9 487 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 CXorf21Q9HAI6 301 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SEC14L3Q9UDX4 400 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SERTAD3Q9UJW9 196 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 SAMHD1Q9Y3Z3 626 aaKnown RBP14.21□□□□□ -0.13
ACTB-204ENST00000425660 PCDHGB5Q9Y5G0 923 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 RP1P56715 2156 aa14.21□□□□□ -0.14
ACTB-204ENST00000425660 H6PDO95479 791 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 IFNW1P05000 195 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 CT62P0C5K7 136 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 UBTFL6P0CB48 400 aaPredicted RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 THRBP10828 461 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 AVPR2P30518 371 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 CAPGP40121 348 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 ADARB1P78563 741 aaKnown RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 GK3PQ14409 553 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 ATAD3BQ5T9A4 648 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 TTLL10Q6ZVT0 673 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 USP51Q70EK9 711 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 VWA5B2Q8N398 1253 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 DHRSXQ8N5I4 330 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 CDRT4Q8N9R6 151 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 OR2I1PQ8NGU4 316 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 OR1F2PQ96R84 312 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 RBCK1Q9BYM8 510 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 PIGUQ9H490 435 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 SMURF2Q9HAU4 748 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 BATF3Q9NR55 127 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 PRTFDC1Q9NRG1 225 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 DUSP22Q9NRW4 184 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 FGF21Q9NSA1 209 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 EXD2Q9NVH0 621 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 TMEFF2Q9UIK5 374 aaPredicted RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 LYVE1Q9Y5Y7 322 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 ENPP4Q9Y6X5 453 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 SPTBP11277 2137 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 A8MU76 341 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 RPLP0P05388 317 aaKnown RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 RHCEP18577 417 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 S1PR1P21453 382 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 MYF6P23409 242 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 RRM2P31350 389 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 HMGA2P52926 109 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 CCL7P80098 99 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 BIKQ13323 160 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 AP1ARQ63HQ0 302 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 PROX1Q92786 737 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 LOXL4Q96JB6 756 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 STACQ99469 402 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 BARD1Q99728 777 aaKnown RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 PIP5K1AQ99755 562 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 LRRN3Q9H3W5 708 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 LANCL2Q9NS86 450 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 C3orf18Q9UK00 162 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 KCND3Q9UK17 655 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 ATXN7L1Q9ULK2 861 aaPredicted RBP14.2□□□□□ -0.14
ACTB-204ENST00000425660 CDC14AQ9UNH5 594 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 SATB2Q9UPW6 733 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 UNC13CQ8NB66 2214 aa14.2□□□□□ -0.14
ACTB-204ENST00000425660 MYOCOSA0A1B0GUC4 107 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 OR10H2O60403 315 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 NME6O75414 186 aaPredicted RBP14.19□□□□□ -0.14
ACTB-204ENST00000425660 CDC123O75794 336 aaPredicted RBP14.19□□□□□ -0.14
ACTB-204ENST00000425660 SOX30O94993 753 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 CBX7O95931 251 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 GNAO1P09471 354 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 PRKACGP22612 351 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 GALNSP34059 522 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 STX4Q12846 297 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 DSG2Q14126 1118 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 DUSP5Q16690 384 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 RFX4Q33E94 735 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 ARHGAP11BQ3KRB8 267 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 CYP27C1Q4G0S4 372 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 GPAT3Q53EU6 434 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 KDM4DQ6B0I6 523 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 C16orf62Q7Z3J2 963 aa14.19□□□□□ -0.14
ACTB-204ENST00000425660 GALNT12Q8IXK2 581 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms