RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NINQ8N4C6 2090 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 FITM1A5D6W6 292 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 PLOD3O60568 738 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SEMA7AO75326 666 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SLITRK5O94991 958 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 GADD45GO95257 159 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 EPHA8P29322 1005 aaPredicted RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 CSF2RBP32927 897 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CDH15P55291 814 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CHRNEQ04844 493 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 KANSL1Q7Z3B3 1105 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 C11orf74Q86VG3 221 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 PLXDC1Q8IUK5 500 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 LACC1Q8IV20 430 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CARFQ8N187 725 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SLC9A6Q92581 669 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CDS1Q92903 461 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 PEX11GQ96HA9 241 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 FEVQ99581 238 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 GRIP2Q9C0E4 1043 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 ING2Q9H160 280 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CALML5Q9NZT1 146 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 RHCGQ9UBD6 479 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SUSD2Q9UGT4 822 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 ARID1BQ8NFD5 2236 aaPredicted RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 CABIN1Q9Y6J0 2220 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 BCKDKO14874 412 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 EPPINO95925 133 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CT62P0C5K7 136 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 CYP4B1P13584 511 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 ELK4P28324 431 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SEPHS1P49903 392 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 TPD52P55327 224 aaPredicted RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 GPLD1P80108 840 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 ZNF691Q5VV52 312 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 TCTN3Q6NUS6 607 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SATL1Q86VE3 508 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 GATAD2AQ86YP4 633 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 SLC5A8Q8N695 610 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 OR6C4Q8NGE1 309 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 NECAB3Q96P71 396 aaPredicted RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 YTHDF1Q9BYJ9 559 aaKnown RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 FAM192AQ9GZU8 254 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 QRSL1Q9H0R6 528 aaKnown RBP24.79■■□□□ 1.56
LDB1-202ENST00000425280 ADAP2Q9NPF8 381 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 DSPPQ9NZW4 1301 aa24.79■■□□□ 1.56
LDB1-202ENST00000425280 PCDH17O14917 1159 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 UGT2B11O75310 529 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 AGR2O95994 175 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 SLC35E2P0CK97 266 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 ACP2P11117 423 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 CDH2P19022 906 aaPredicted RBP24.78■■□□□ 1.56
LDB1-202ENST00000425280 CD1CP29017 333 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 SYT16Q17RD7 645 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 EDAQ92838 391 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 FSCN3Q9NQT6 498 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 RLIMQ9NVW2 624 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 NLGN3Q9NZ94 848 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 VCANP13611 3396 aa24.78■■□□□ 1.56
LDB1-202ENST00000425280 ZIC2O95409 532 aaPredicted RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 IFI6P09912 130 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 CLK3P49761 638 aaKnown RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 PDX1P52945 283 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 HSD11B2P80365 405 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 IL18R1Q13478 541 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 DUSP5Q16690 384 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 EXOSC6Q5RKV6 272 aaKnown RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 DEF8Q6ZN54 512 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 METTL27Q8N6F8 245 aaPredicted RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 CTHRC1Q96CG8 243 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 MMABQ96EY8 250 aaPredicted RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 A0A1B0GTQ1 180 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 CASC3O15234 703 aaKnown RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 HRO43593 1189 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 GRM7Q14831 915 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 SNAP47Q5SQN1 464 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 DGAT2L6Q6ZPD8 337 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 C1orf210Q8IVY1 113 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 PHF10Q8WUB8 498 aaKnown RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 PIGKQ92643 395 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 ZG16BQ96DA0 208 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 PINK1Q9BXM7 581 aa24.77■■□□□ 1.56
LDB1-202ENST00000425280 TMEM184BQ9Y519 407 aaPredicted RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 MN1Q10571 1320 aaPredicted RBP24.77■■□□□ 1.56
LDB1-202ENST00000425280 PI4KAP42356 2102 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 ASXL3Q9C0F0 2248 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 A8MVJ9 347 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 TGFBR3LH3BV60 316 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 M0R3H8 397 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 PCDHGA12O60330 932 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 BMP10O95393 424 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 LGI1O95970 557 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 AVPR1BP47901 424 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 ISL1P61371 349 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 EXOSC7Q15024 291 aaKnown RBP24.76■■□□□ 1.55
LDB1-202ENST00000425280 ADAMTS18Q8TE60 1221 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 CCDC74AQ96AQ1 378 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 SEMA5BQ9P283 1151 aa24.76■■□□□ 1.55
LDB1-202ENST00000425280 MRPS33Q9Y291 106 aaKnown RBP24.76■■□□□ 1.55
LDB1-202ENST00000425280 H3BMH7 237 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms