RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 C16orf78Q8WTQ4 265 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 LURAP1Q96LR2 239 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 ZNF597Q96LX8 424 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 GNRHR2Q96P88 292 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 SECISBP2Q96T21 854 aaKnown RBP16.91■□□□□ 0.3
NUP50-207ENST00000424634 UBQLN3Q9H347 655 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 TNFRSF12AQ9NP84 129 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 MID1IP1Q9NPA3 183 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 Q9UFV3 132 aa16.91■□□□□ 0.3
NUP50-207ENST00000424634 SERTM1A2A2V5 107 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 WDR1O75083 606 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 PPM1BO75688 479 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 SNX4O95219 450 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 MYL2P10916 166 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 DRD2P14416 443 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 GDF1P27539 372 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 PRSS53Q2L4Q9 553 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 ZNF628Q5EBL2 1059 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 C1orf185Q5T7R7 199 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 GALNT18Q6P9A2 607 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 LIX1LQ8IVB5 337 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 HGDQ93099 445 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
NUP50-207ENST00000424634 LCORQ96JN0 433 aaPredicted RBP16.9■□□□□ 0.3
NUP50-207ENST00000424634 NODALQ96S42 347 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 KCNJ16Q9NPI9 418 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 CFL2Q9Y281 166 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
NUP50-207ENST00000424634 GNG14A0A1W2PPG7 69 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 PLIN3O60664 434 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 GLRA3O75311 464 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 NAGAP17050 411 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 DRD5P21918 477 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 TIA1P31483 386 aaKnown RBP eCLIP16.89■□□□□ 0.29
NUP50-207ENST00000424634 PTGDSP41222 190 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 PPICP45877 212 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.29
NUP50-207ENST00000424634 NAGLUP54802 743 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 ACSM2AQ08AH3 577 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 SPIN4Q56A73 249 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 ACSM2BQ68CK6 577 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 SEM1Q6ZVN7 128 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 NUP54Q7Z3B4 507 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 OR9A2Q8NGT5 310 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 UBLCP1Q8WVY7 318 aaPredicted RBP16.89■□□□□ 0.29
NUP50-207ENST00000424634 KAT2AQ92830 837 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 TRIM44Q96DX7 344 aaPredicted RBP16.89■□□□□ 0.29
NUP50-207ENST00000424634 OMA1Q96E52 524 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 CCDC126Q96EE4 140 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 HSPBAP1Q96EW2 488 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 C14orf79Q96F83 325 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 EBPLQ9BY08 206 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 B4GALT7Q9UBV7 327 aa16.89■□□□□ 0.29
NUP50-207ENST00000424634 CCDC168Q8NDH2 2452 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 C2orf72A6NCS6 295 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 SMIM23A6NLE4 172 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 KDM4EB2RXH2 506 aaPredicted RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 TRAPPC6AO75865 159 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 HPNP05981 417 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 HOXD4P09016 255 aaPredicted RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 MSX1P28360 303 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 SSTR2P30874 369 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 CRHR1P34998 444 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 ZFP36L2P47974 494 aaKnown RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 CDK9P50750 372 aaKnown RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 CEBPEQ15744 281 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 FRMD7Q6ZUT3 714 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 ULK2Q8IYT8 1036 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 CNPY4Q8N129 248 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 TMEM41AQ96HV5 264 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 TIMP4Q99727 224 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 PFDN4Q9NQP4 134 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 SLC35C2Q9NQQ7 365 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 EHD3Q9NZN3 535 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 PRODH2Q9UF12 536 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 GPR55Q9Y2T6 319 aaPredicted RBP16.88■□□□□ 0.29
NUP50-207ENST00000424634 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 PCDHGB3Q9Y5G1 929 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 KIAA1549Q9HCM3 1950 aa16.88■□□□□ 0.29
NUP50-207ENST00000424634 TEP1Q99973 2627 aaKnown RBP16.87■□□□□ 0.29
NUP50-207ENST00000424634 GNB5O14775 395 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 TO15178 435 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 ACOX3O15254 700 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 ICOSLGO75144 302 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 UGT2B11O75310 529 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 ANXA4P09525 319 aaPredicted RBP16.87■□□□□ 0.29
NUP50-207ENST00000424634 GABRA1P14867 456 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 KRT15P19012 456 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 PTPN6P29350 595 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 CCT5P48643 541 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 MASP1P48740 699 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 DNAJB13P59910 316 aa16.87■□□□□ 0.29
NUP50-207ENST00000424634 RPP38P78345 283 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms