RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 A8MUA0 341 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 FAM171A2A8MVW0 826 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 TCP11X1B4DZS4 312 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 GOLGA8RI6L899 631 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CYR61O00622 381 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CLDN4O14493 209 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 PLPP1O14494 284 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 MYO1DO94832 1006 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 TOX4O94842 621 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ETHE1O95571 254 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 KIR2DL3P43628 341 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 SLCO1A2P46721 670 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CCNG1P51959 295 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 RAP1GDS1P52306 607 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ARFIP1P53367 373 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CDH13P55290 713 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 TAS2R50P59544 299 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 VSNL1P62760 191 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 SLC13A2Q13183 592 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CUL3Q13618 768 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 RCN2Q14257 317 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 MST1LQ2TV78 715 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 PGS1Q32NB8 556 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 GGTA1PQ4G0N0 100 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 DEPDC1Q5TB30 811 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 FRG2Q64ET8 278 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 OR4C11Q6IEV9 310 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 H3F3CQ6NXT2 135 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CLEC18BQ6UXF7 455 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 RPS27LQ71UM5 84 aaKnown RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CLNKQ7Z7G1 428 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 LGI4Q8N135 537 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 BEST3Q8N1M1 668 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ZCCHC7Q8N3Z6 543 aaKnown RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 KIF2BQ8N4N8 673 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 SLC5A8Q8N695 610 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CLEC18CQ8NCF0 446 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 NFAM1Q8NET5 270 aaPredicted RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 OR1N1Q8NGS0 311 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ACMSDQ8TDX5 336 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ELP5Q8TE02 316 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 HAS2Q92819 552 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ATP6V1E2Q96A05 226 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 RGMAQ96B86 450 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF354BQ96LW1 612 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 FRG2BQ96QU4 278 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 BARD1Q99728 777 aaKnown RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CCDC77Q9BR77 488 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CENPKQ9BS16 269 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 NTMT1Q9BV86 223 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 C1QTNF3Q9BXJ4 246 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF717Q9BY31 904 aaPredicted RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 ADAP2Q9NPF8 381 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 STMN3Q9NZ72 180 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 COPG1Q9Y678 874 aaKnown RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 SPACA6W5XKT8 324 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 USP9YO00507 2555 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 A0A0A6YYD5 115 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TRBV11-1A0A0K0K1C0 115 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 A0A1W2PPM1 405 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SYNDIG1LA6NDD5 238 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SMIM23A6NLE4 172 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 FOXE1O00358 373 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 PPP6CO00743 305 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TMPRSS11DO60235 418 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF500O60304 480 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 CTNSO60931 367 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 LDB3O75112 727 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 GLRA3O75311 464 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 EEDO75530 441 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SEMA3DO95025 777 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 OTCP00480 354 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 GSTA1P08263 222 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TSPAN8P19075 237 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TAC1P20366 129 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 CPN2P22792 545 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ATP5F1P24539 256 aaPredicted RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 BSGP35613 385 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 HSD17B3P37058 310 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SLC6A9P48067 706 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 HERVK_113P63132 956 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TNFRSF17Q02223 184 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 HGFACQ04756 655 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 STX4Q12846 297 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 IFT88Q13099 833 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 SLAMF1Q13291 335 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 MRPL49Q13405 166 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TUBA3CQ13748 450 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 RASA2Q15283 850 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ELAVL1Q15717 326 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 INAQ16352 499 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 MEP1AQ16819 746 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 RNF151Q2KHN1 245 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF678Q5SXM1 525 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 FAM219BQ5XKK7 198 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
HMGN1-205ENST00000419378 TUBA3EQ6PEY2 450 aa6.43□□□□□ -1.38
HMGN1-205ENST00000419378 GPR180Q86V85 440 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms