RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 DEPDC7Q96QD5 511 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR7D2Q96RA2 312 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CMKLR1Q99788 373 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CNPPD1Q9BV87 410 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SPATA5L1Q9BVQ7 753 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 BTBD2Q9BX70 525 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TRIM4Q9C037 500 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SLC24A3Q9HC58 644 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 RXFP3Q9NSD7 469 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 DCAF13Q9NV06 445 aaKnown RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MAT2BQ9NZL9 334 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 COPS7AQ9UBW8 275 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 NKX1-2Q9UD57 310 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SEC14L3Q9UDX4 400 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 GPN3Q9UHW5 284 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SLC13A4Q9UKG4 626 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 NXT1Q9UKK6 140 aaKnown RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 LIPT1Q9Y234 373 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HCN4Q9Y3Q4 1203 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 DTNAQ9Y4J8 743 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PCDHGA1Q9Y5H4 931 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MAU2Q9Y6X3 613 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CUL9Q8IWT3 2517 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MUC3AQ02505 3323 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 A0A1W2PS29 197 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SAC3D1A6NKF1 404 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 B4E171 279 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 FAM227AF5H4B4 570 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 POLR1CO15160 346 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CASC3O15234 703 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SERPINB7O75635 380 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PRKD3O94806 890 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SOX30O94993 753 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 OPN1SWP03999 348 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 IFNW1P05000 195 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ALPPP05187 535 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 JMJD7P0C870 316 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 OR12D1P0DN82 309 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 VSIG8P0DPA2 414 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CDK4P11802 303 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 FGF5P12034 268 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CD59P13987 128 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF23P17027 643 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ITGA2P17301 1181 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 MAOAP21397 527 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 AGXTP21549 392 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 KDELR2P33947 212 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 GALNSP34059 522 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 NBL1P41271 181 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 TSPAN7P41732 249 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CLCN2P51788 898 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PGDP52209 483 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PDX1P52945 283 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CASP9P55211 416 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PCBP3P57721 371 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SNRPNP63162 240 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 DCDP81605 110 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 EIF3IQ13347 325 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ELAVL1Q15717 326 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ADRM1Q16186 407 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SYT16Q17RD7 645 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PRICKLE4Q2TBC4 344 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 NKAIN1Q4KMZ8 207 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 EIPR1Q53HC9 387 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 RPS26P11Q5JNZ5 115 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 OGFRL1Q5TC84 451 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ENPP6Q6UWR7 440 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF574Q6ZN55 896 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 FKBP9P1Q75LS8 142 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CBLL1Q75N03 491 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CCDC80Q76M96 950 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 EIF3MQ7L2H7 374 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 GALNT10Q86SR1 603 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ARMC8Q8IUR7 673 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 OR4N5Q8IXE1 308 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 LINC00528Q8N1L1 170 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PACRGLQ8N7B6 248 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ICA1LQ8NDH6 482 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SPPL2AQ8TCT8 520 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SLC9A6Q92581 669 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PROX1Q92786 737 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 RAB8BQ92930 207 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 UCN3Q969E3 161 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 EME1Q96AY2 570 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ANKRD9Q96BM1 317 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 TAMM41Q96BW9 452 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 LIN37Q96GY3 246 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CENPNQ96H22 339 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 RBM18Q96H35 190 aaKnown RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PYURFQ96I23 114 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 FBXL20Q96IG2 436 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 TPD52L3Q96J77 140 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 VPS50Q96JG6 964 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 STACQ99469 402 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF184Q99676 751 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PKP2Q99959 881 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 BDH2Q9BUT1 245 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 C9orf16Q9BUW7 83 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 COL25A1Q9BXS0 654 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms