RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 COPS7BQ9H9Q2 264 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 RNPEPL1Q9HAU8 725 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 MAGEF1Q9HAY2 307 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 NRN1Q9NPD7 142 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 ESM1Q9NQ30 184 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 MEPEQ9NQ76 525 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 CENPMQ9NSP4 180 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 STARD5Q9NSY2 213 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 ACOXLQ9NUZ1 547 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 KLRF1Q9NZS2 232 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 RAI14Q9P0K7 980 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 SENP1Q9P0U3 644 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 MBD2Q9UBB5 411 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 RPS6KB2Q9UBS0 482 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 SEC14L4Q9UDX3 406 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 TUBGCP4Q9UGJ1 667 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 SLC2A6Q9UGQ3 507 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 APOBEC3BQ9UH17 382 aaKnown RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 CIDEBQ9UHD4 219 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 TEKT2Q9UIF3 430 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 KLHL21Q9UJP4 597 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 LEF1Q9UJU2 399 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 MRTO4Q9UKD2 239 aaKnown RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 EMCNQ9ULC0 261 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 FOXA2Q9Y261 457 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 MTF2Q9Y483 593 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 AFF2P51816 1311 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 NPC1L1Q9UHC9 1359 aa0.31□□□□□ -2.36
SNORA40.8-201ENST00000411034 CFAP65Q6ZU64 1925 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 PTPRUQ92729 1446 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ARID1AO14497 2285 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SYNJ2O15056 1496 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 NPIPA5A0A0B4J1W7 369 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 A0A0J9YVX5 310 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 C13orf42A0A1B0GVH6 325 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF320A2RRD8 509 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 PINLYPA6NC86 204 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 C5orf51A6NDU8 294 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 HMGB1P1B2RPK0 211 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 NPIPA5E9PKD4 350 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 H0Y626 953 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 H3BMH7 237 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 PDLIM1O00151 329 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TLR4O00206 839 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CACNB4O00305 520 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SLC28A1O00337 649 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 EEF2KO00418 725 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 EI24O14681 340 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF263O14978 683 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ARPC1BO15143 372 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 STX6O43752 255 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TYROBPO43914 113 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 LCMT2O60294 686 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SDC3O75056 442 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 RTN2O75298 545 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF254O75437 659 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 GMNNO75496 209 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CRCPO75575 148 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SERF1AO75920 110 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 STK17BO94768 372 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 NOL4O94818 638 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TOXO94900 526 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TGDSO95455 350 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 APBB3O95704 486 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CXCL14O95715 111 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ECDO95905 644 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 GAS8O95995 478 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ACTL6AO96019 429 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TIMP1P01033 207 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 IGLV1-47P01700 117 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SFTPBP07988 381 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SERPINF2P08697 491 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CCDC166P0CW27 439 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 MBL2P11226 248 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CYP11B1P15538 503 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF17P17021 662 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF32P17041 273 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 UGT1A6P19224 532 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 FUT3P21217 361 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 MDKP21741 143 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZP3P21754 424 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CCNE1P24864 410 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 PTBP1P26599 531 aaKnown RBP eCLIP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 STIP1P31948 543 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CTNNB1P35222 781 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 RBMXP38159 391 aaKnown RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TNNT3P45378 269 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 PITPNBP48739 271 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 TRPC1P48995 793 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 NPY2RP49146 381 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 NT5C2P49902 561 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 P2RY4P51582 365 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 GPC3P51654 580 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 CCL11P51671 97 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SGSHP51688 502 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 SLC7A2P52569 658 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 ZNF133P52736 654 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 GEMP55040 296 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 DIO3P55073 304 aa0.3□□□□□ -2.36
SNORA40.8-201ENST00000411034 UCNP55089 124 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms