RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 VWA5B2Q8N398 1253 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 NXPE3Q969Y0 559 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 RAB7BQ96AH8 199 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 C1GALT1C1Q96EU7 318 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 RNFT2Q96EX2 444 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 BBS4Q96RK4 519 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 GPA33Q99795 319 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 COQ7Q99807 217 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 ANKRA2Q9H9E1 313 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 KCNK12Q9HB15 430 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 PRRT4C9JH25 899 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 MAN2B1O00754 1011 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 AP3D1O14617 1153 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 POLR1CO15160 346 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 GUCY1B2O75343 617 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CHRM4P08173 479 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPA1P09651 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 GAAP10253 952 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PSMB5P28074 263 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 BUD31P41223 144 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 MTNR1AP48039 350 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TGM4P49221 684 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 MAN2A2P49641 1150 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PPP3R1P63098 170 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 NTHL1P78549 312 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 MRPS15P82914 257 aaKnown RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TSPAN31Q12999 210 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 SLC9A5Q14940 896 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 FLYWCH1Q4VC44 716 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 KIAA1161Q6NSJ0 714 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CD200R1LQ6Q8B3 271 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF730Q6ZMV8 503 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ETFBKMTQ8IXQ9 262 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PLA2G15Q8NCC3 412 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 KATNB1Q9BVA0 655 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 SAP130Q9H0E3 1048 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ANKRD19PQ9H560 264 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ACSL5Q9ULC5 683 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 A0A087WUU8 490 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 LRIT2A6NDA9 550 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 KDM4EB2RXH2 506 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 LCMT2O60294 686 aaKnown RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ALPPP05187 535 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CLEC2LP0C7M8 214 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PTBP1P26599 531 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 IFNA8P32881 189 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ARFIP1P53367 373 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PRDX1Q06830 199 aaKnown RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CDK10Q15131 360 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF628Q5EBL2 1059 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TCEAL5Q5H9L2 206 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 METAP1DQ6UB28 335 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 KIF18BQ86Y91 864 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 GATAD2AQ86YP4 633 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 AMER3Q8N944 861 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TP53I13Q8NBR0 393 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-204ENST00000404424 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 OR56A1Q8NGH5 318 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TM9SF4Q92544 642 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 SLC9A6Q92581 669 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM203Q969S6 136 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 CARD8Q9Y2G2 431 aa10.11□□□□□ -0.79
CLIP4-204ENST00000404424 NOTCH4Q99466 2003 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TRDV1A0A1B0GX56 115 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 C1QTNF3-AMACRE9PGA6 284 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 HCN1O60741 890 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 UBXN7O94888 489 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SLC35G4P0C7Q5 338 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 CCL5P13501 91 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GJA8P48165 433 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 RPS25P62851 125 aaKnown RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 HTRA4P83105 476 aaPredicted RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 DAB2P98082 770 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 CDK3Q00526 305 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 FUT5Q11128 374 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TRAM2Q15035 370 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TAB1Q15750 504 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 PYDC2Q56P42 97 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 C1QTNF12Q5T7M4 302 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 OR2G6Q5TZ20 316 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GRASPQ7Z6J2 395 aaPredicted RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ASCC1Q8N9N2 400 aaKnown RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SIMC1Q8NDZ2 872 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GATAD2BQ8WXI9 593 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 UCN3Q969E3 161 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 RFKQ969G6 155 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 FRMD6Q96NE9 622 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 LRRC3BQ96PB8 259 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 DEPDC7Q96QD5 511 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 C17orf62Q9BQA9 187 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TEX12Q9BXU0 123 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 HDAC8Q9BY41 377 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 PLA2G12AQ9BZM1 189 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 C11orf54Q9H0W9 315 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms