RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 BPIP17213 487 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 MAPK3P27361 379 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 BMPR1AP36894 532 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 GSTM4Q03013 218 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 EMC10Q5UCC4 262 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 KIAA0895LQ68EN5 471 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 FAM46BQ96A09 425 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 DDIT4LQ96D03 193 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 TINAGL1Q9GZM7 467 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 SSU72Q9NP77 194 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 MDFIC2A0A1B0GVS7 189 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 MATN2O00339 956 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 SLC1A7O00341 560 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 RNH1P13489 461 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 ADRB3P13945 408 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 ZSWIM9Q86XI8 627 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 G3V3Y1 287 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 DBHP09172 617 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PVRP15151 417 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■■■■■ 28.6
VAPA-202ENST00000400000 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 RGS6P49758 472 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 ARSDP51689 593 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CAV3P56539 151 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 LIPJQ5W064 366 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.314e-6■□□□□ 8.1
VAPA-202ENST00000400000 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 SGTBQ96EQ0 304 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 TOE1Q96GM8 510 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 CRB3Q9BUF7 120 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 B3GNT2Q9NY97 397 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 Q9Y3F1 56 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 LSM5Q9Y4Y9 91 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 MYH11P35749 1972 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 WDPCPO95876 746 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 FRKP42685 505 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 MAB21L1Q13394 359 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 A0A0A6YYC8 382 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 I3L1I5 382 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 VEGFDO43915 354 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 NR2C1P13056 603 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 ZNF43P17038 809 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PGCP20142 388 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PRKXP51817 358 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 DSC1Q08554 894 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 NKAIN2Q5VXU1 208 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 C9orf43Q8TAL5 461 aaPredicted RBP13.09□□□□□ -0.31
VAPA-202ENST00000400000 APIPQ96GX9 242 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 CNIH4Q9P003 139 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 SLC7A7Q9UM01 511 aa13.09□□□□□ -0.31
VAPA-202ENST00000400000 A6NIN4 97 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 F5H0A9 414 aaPredicted RBP13.08□□□□□ -0.31
VAPA-202ENST00000400000 RDH16O75452 317 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 RBBP9O75884 186 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 LATS1O95835 1130 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.31
VAPA-202ENST00000400000 MYOGP15173 224 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 GDF1P27539 372 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.31
VAPA-202ENST00000400000 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 ZNF572Q7Z3I7 529 aaPredicted RBP13.08□□□□□ -0.31
VAPA-202ENST00000400000 ARRDC3Q96B67 414 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 GPR83Q9NYM4 423 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.31
VAPA-202ENST00000400000 TIMP1P01033 207 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 HOXD13P35453 343 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 TLE3Q04726 772 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 VMACQ2NL98 169 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 ASTE1Q2TB18 679 aaPredicted RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 COL28A1Q2UY09 1125 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 CDHR3Q6ZTQ4 885 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SERPINA12Q8IW75 414 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SLC45A1Q9Y2W3 748 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 M0R3H8 397 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 GOSR2O14653 212 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 ABHD18Q0P651 414 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 LRR1Q96L50 414 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 ARMC1Q9NVT9 282 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 TMPRSS11EQ9UL52 423 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms