RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 E2F1Q01094 437 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 KIAA0930Q6ICG6 404 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PAQR3Q6TCH7 311 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 UNC93AQ86WB7 457 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 KAT2AQ92830 837 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 NEU1Q99519 415 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 WNT5BQ9H1J7 359 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CHRDQ9H2X0 955 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PRO1933Q9H354 126 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CA5BQ9Y2D0 317 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 COL18A1P39060 1754 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PEX10O60683 326 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 RECQL4O94761 1208 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 S1PR4O95977 384 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 UCHL1P09936 223 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PPP3CBP16298 524 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 NPR2P20594 1047 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 WARSP23381 471 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CCL23P55773 120 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SEC61A1P61619 476 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 DGKZQ13574 1117 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 USF2Q15853 346 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 MARCH9Q86YJ5 346 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC30A8Q8IWU4 369 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CFAP206Q8IYR0 622 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC43A2Q8N370 569 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SAMD12Q8N8I0 201 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 FAM193BQ96PV7 902 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 POLDIP3Q9BY77 421 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 RNF32Q9H0A6 362 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 SARS2Q9NP81 518 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 UPK3BL1B0FP48 263 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 UPK3BL2E5RIL1 263 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 MBP02144 154 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 HSD3B1P14060 373 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 HOXA6P31267 233 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 IL10RBQ08334 325 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 ILKQ13418 452 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 CAPSQ13938 189 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC36A2Q495M3 483 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 CARFQ8N187 725 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 GMCL1P1Q8NEA9 526 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 OR4A15Q8NGL6 344 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 WFIKKN2Q8TEU8 576 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 C7orf34Q96L11 122 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC6A18Q96N87 628 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 OR4K3Q96R72 315 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 PIGQQ9BRB3 760 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 BRD9Q9H8M2 597 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 AAR2Q9Y312 384 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 NPTNQ9Y639 398 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 TRBV5-3A0A0A0MS03 114 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 BTBD17A6NE02 478 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF879B4DU55 563 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 FPGTO14772 594 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 DGCR2P98153 550 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 NCF4Q15080 339 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC14A2Q15849 920 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 METAP1DQ6UB28 335 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 TSEN54Q7Z6J9 526 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 NEIL3Q8TAT5 605 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 GPR21Q99679 349 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 TSSK6Q9BXA6 273 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 DUSP16Q9BY84 665 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 SYNDIG1Q9H7V2 258 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 DNAJB11Q9UBS4 358 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 CA14Q9ULX7 337 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 POFUT2Q9Y2G5 429 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 GSTK1Q9Y2Q3 226 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-203ENST00000394573 TMEM218A2RU14 115 aa11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 B4GALT5O43286 388 aa11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 CDC123O75794 336 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 WISP3O95389 354 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 SEMG1P04279 462 aa11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 WNT1P04628 370 aa11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 C6P13671 934 aa11.85□□□□□ -0.51
SLC28A1-203ENST00000394573 IL1RNP18510 177 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms