RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SLC9A6Q92581 669 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 RERGQ96A58 199 aaPredicted RBP14.14□□□□□ -0.15
GPC3-202ENST00000394299 C3orf14Q9HBI5 128 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 GPR83Q9NYM4 423 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 MKLN1Q9UL63 735 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 NTNG1Q9Y2I2 539 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CHST2Q9Y4C5 530 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 SGK494L7N484 410 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 GABRB1P18505 474 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 ALDH4A1P30038 563 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CNR2P34972 360 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CTSKP43235 329 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 PDX1P52945 283 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 DYNC1I2Q13409 638 aaKnown RBP14.14□□□□□ -0.15
GPC3-202ENST00000394299 PODNL1Q6PEZ8 512 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 KRT73Q86Y46 540 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 LRRC25Q8N386 305 aaPredicted RBP14.14□□□□□ -0.15
GPC3-202ENST00000394299 GGHQ92820 318 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CDS1Q92903 461 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 BCL2L10Q9HD36 194 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 ACOT13Q9NPJ3 140 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 REV1Q9UBZ9 1251 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 TMCC3Q9ULS5 477 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 SLC22A7Q9Y694 548 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 FGF17O60258 216 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 LGI1O95970 557 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 CCNA2P20248 432 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 POU3F3P20264 500 aaPredicted RBP14.13□□□□□ -0.15
GPC3-202ENST00000394299 PSMB9P28065 219 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 CRISP1P54107 249 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 TMBIM6P55061 237 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 SHC2P98077 582 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 TUBA3CQ13748 450 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 CCNJQ5T5M9 372 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 BHLHB9Q6PI77 547 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 RORBQ92753 470 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 CNDP2Q96KP4 475 aaKnown RBP14.13□□□□□ -0.15
GPC3-202ENST00000394299 GPA33Q99795 319 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 ARMC7Q9H6L4 198 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 SLC2A4RGQ9NR83 387 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 GPR27Q9NS67 375 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 MAN2C1Q9NTJ4 1040 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 FTSJ1Q9UET6 329 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 PCDHGB1Q9Y5G3 927 aa14.13□□□□□ -0.15
GPC3-202ENST00000394299 KIR2DS5A0A0G2JLQ3 304 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 A0A0G2JNG1 304 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 A0A0J9YY10 115 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 KRBA1A5PL33 1030 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 KIR2DS3K7RE56 304 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 BCAS1O75363 584 aaPredicted RBP14.12□□□□□ -0.15
GPC3-202ENST00000394299 ADRA2AP08913 450 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 TARDBPQ13148 414 aaKnown RBP eCLIP14.12□□□□□ -0.15
GPC3-202ENST00000394299 KIR2DS5Q14953 304 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ZNF311Q5JNZ3 666 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 MLIPQ5VWP3 458 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 CLIP4Q8N3C7 705 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 CSNK1A1LQ8N752 337 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 AVL9Q8NBF6 648 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 BBS10Q8TAM1 723 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 MIPOL1Q8TD10 442 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 GAB3Q8WWW8 586 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 IL4I1Q96RQ9 567 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 COPS4Q9BT78 406 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 RBCK1Q9BYM8 510 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 DUSP12Q9UNI6 340 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 CENPVL1A0A0U1RR11 272 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 OR5K3A6NET4 321 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 OR2W5A6NFC9 320 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 TRIM64BA6NI03 449 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 STSP08842 583 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 PTNP21246 168 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ACVR2AP27037 513 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 TGFBR1P36897 503 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ENTPD1P49961 510 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 MLLT10P55197 1068 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 PGBD2Q6P3X8 592 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ABHD13Q7L211 337 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 BCDIN3DQ7Z5W3 292 aaKnown RBP14.12□□□□□ -0.15
GPC3-202ENST00000394299 PARGQ86W56 976 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ADAMTS15Q8TE58 950 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 THAP11Q96EK4 314 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 FUZQ9BT04 418 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 FNDC11Q9BVV2 318 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ACTRT3Q9BYD9 372 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 MIR1-1HGQ9H1L0 117 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 MS4A12Q9NXJ0 267 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 TAS2R16Q9NYV7 291 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 PSORS1C1Q9UIG5 152 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 ACAD8Q9UKU7 415 aa14.12□□□□□ -0.15
GPC3-202ENST00000394299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.12□□□□□ -0.15
GPC3-202ENST00000394299 A0A0G2JPF8 293 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 SH3PXD2BA1X283 911 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 HNRNPCL2B2RXH8 293 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 HNRNPCL3B7ZW38 293 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
GPC3-202ENST00000394299 MED26O95402 600 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 HNRNPCL4P0DMR1 293 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms