RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SP2Q02086 613 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PRAMEF14Q5SWL7 426 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 KDM8Q8N371 416 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 OR5AK3PQ8NH89 298 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 ZFAND1Q8TCF1 268 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 GATA5Q9BWX5 397 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SLC1A7O00341 560 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 CNTN5O94779 1100 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 KLK3P07288 261 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 SNCAP37840 140 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SOX2P48431 317 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 UBE2NLQ5JXB2 153 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 LFNGQ8NES3 379 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 OR1M1Q8NGA1 313 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 MAGIXQ9H6Y5 334 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PCDHGA1Q9Y5H4 931 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 AKR1A1P14550 325 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 GSK3BP49841 420 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 GDPGP1Q6ZNW5 385 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 IL17RCQ8NAC3 791 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 OR8J3Q8NGG0 315 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PITX2Q99697 317 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 KLK1P06870 262 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 RPS17P08708 135 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 PPP3CBP16298 524 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 EPHA1P21709 976 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 PRSS48Q7RTY5 328 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 RNF130Q86XS8 419 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 LACC1Q8IV20 430 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 LILRB4Q8NHJ6 448 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 NICN1Q9BSH3 213 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 MATN3O15232 486 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 RBMS1P29558 406 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 RAB11AP62491 216 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SLBPQ14493 270 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP49-203ENST00000394253 LY6KQ17RY6 165 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 C6orf141Q5SZD1 244 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PRSS55Q6UWB4 352 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 SLC51AQ86UW1 340 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP49-203ENST00000394253 EIF2DP41214 584 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 ZNF791Q3KP31 576 aaPredicted RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 TMEM220Q6QAJ8 160 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 IRGQQ8WZA9 623 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 MGLLQ99685 303 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 RAB5AP20339 215 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 GJA5P36382 358 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PPP4CP60510 307 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 SFRP5Q5T4F7 317 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 ZDHHC11Q9H8X9 412 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 UNC119BA6NIH7 251 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 OR6C75A6NL08 312 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 HTRA2O43464 458 aaPredicted RBP12.83□□□□□ -0.35
USP49-203ENST00000394253 MAS1P04201 325 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 ARAFP10398 606 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 BIDP55957 195 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 PLD5Q8N7P1 536 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 C12orf29Q8N999 325 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 HPSE2Q8WWQ2 592 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 DUSP9Q99956 384 aaKnown RBP12.83□□□□□ -0.35
USP49-203ENST00000394253 CREBZFQ9NS37 354 aa12.83□□□□□ -0.35
USP49-203ENST00000394253 TMEM63AO94886 807 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 HSF1Q00613 529 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 FKBP10Q96AY3 582 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 GOLT1BQ9Y3E0 138 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 RAB3AP20336 220 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 CORO1AP31146 461 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 ZNF763Q0D2J5 394 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 P2RY13Q9BPV8 354 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 FUOMA2VDF0 154 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MROH6A6NGR9 719 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 RFC2P35250 354 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 SPARTQ8N0X7 666 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 DOHHQ9BU89 302 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 NIT2Q9NQR4 276 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 NPAP1Q9NZP6 1156 aa12.83□□□□□ -0.36
USP49-203ENST00000394253 ERI3O43414 337 aaKnown RBP12.83□□□□□ -0.36
USP49-203ENST00000394253 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms