RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 OR51V1Q9H2C8 321 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 GPR34Q9UPC5 381 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 PLEKHM1Q9Y4G2 1056 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 CLCA3PQ9Y6N3 262 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 DOCK4Q8N1I0 1966 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 TRBV4-1A0A0J9YWV2 114 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 FOXE1O00358 373 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 GFRA2O00451 464 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 IGFBP4P22692 258 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CERS1P27544 350 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 GJA4P35212 333 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 FBXO43Q4G163 708 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 BCL7AQ4VC05 210 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SOWAHCQ53LP3 525 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 TMEM31Q5JXX7 168 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 DDI2Q5TDH0 399 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 TAF8Q7Z7C8 310 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 GHDCQ8N2G8 530 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 TMIEQ8NEW7 156 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 OR4K5Q8NGD3 323 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 HMGB4Q8WW32 186 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 GGHQ92820 318 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 METTL2AQ96IZ6 378 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 FRMD6Q96NE9 622 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 RAB11FIP5Q9BXF6 653 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 PRSS16Q9NQE7 514 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SIRT5Q9NXA8 310 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 MGAT4BQ9UQ53 548 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CFL2Q9Y281 166 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 MAU2Q9Y6X3 613 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 PLPP1O14494 284 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PRSS23O95084 383 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CPNE6O95741 557 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PLATP00750 562 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 GASTP01350 101 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 HMGN2P05204 90 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 CENPAP49450 140 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 KCNJ10P78508 379 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SIM1P81133 766 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 RPL6Q02878 288 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 ZXDCQ2QGD7 858 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 FRMPD2BQ6IN97 320 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 HSDL2Q6YN16 418 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 RBM45Q8IUH3 476 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 ZFP41Q8N8Y5 198 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CRELD1Q96HD1 420 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 LRR1Q96L50 414 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 INSM2Q96T92 566 aaPredicted RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC17A9Q9BYT1 436 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC22A4Q9H015 551 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PPIL3Q9H2H8 161 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 SYNDIG1Q9H7V2 258 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 ZNF304Q9HCX3 659 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 COMMD3Q9UBI1 195 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 MLXQ9UH92 298 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CLEC4AQ9UMR7 237 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CA5BQ9Y2D0 317 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 OR10H1Q9Y4A9 318 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 AGAP14A8MT82 685 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PPM1DO15297 605 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 RNGTTO60942 597 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 ARAFP10398 606 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 RPS21P63220 83 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC35A2P78381 396 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 AQP6Q13520 282 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 ZNF750Q32MQ0 723 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC35F1Q5T1Q4 408 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 COX18Q8N8Q8 333 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SNX18Q96RF0 628 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 SLC30A2Q9BRI3 323 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 ASPNQ9BXN1 380 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 NDRG2Q9UN36 371 aaKnown RBP9.97□□□□□ -0.81
CALD1-203ENST00000393118 PPIL1Q9Y3C6 166 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PCDHGB6Q9Y5F9 930 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 CACNA1CQ13936 2221 aa9.97□□□□□ -0.81
CALD1-203ENST00000393118 KDM4BO94953 1096 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 CDRT1O95170 752 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SOX3P41225 446 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SLC19A1P41440 591 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SCRN3Q0VDG4 424 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 BTN1A1Q13410 526 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 IRF4Q15306 451 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 FAM205BPQ63HN1 556 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 FAM71E1Q6IPT2 247 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 FBXO46Q6PJ61 603 aaPredicted RBP9.96□□□□□ -0.81
CALD1-203ENST00000393118 IKBIPQ70UQ0 350 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 NUP43Q8NFH3 380 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 MRGPRX3Q96LB0 322 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 PRR14Q9BWN1 585 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SFXN1Q9H9B4 322 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 ANKRA2Q9H9E1 313 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SNX11Q9Y5W9 270 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms