RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 IL20RAQ9UHF4 553 aa12.34□□□□□ -0.43
PTPRN2-203ENST00000389418 TTC3P53804 2025 aa12.34□□□□□ -0.43
PTPRN2-203ENST00000389418 PRLHRP49683 370 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 RPS3AP61247 264 aaKnown RBP12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 LCN8Q6JVE9 175 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 DEFB123Q8N688 67 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 KATNBL1Q9H079 304 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 ACTR10Q9NZ32 417 aa12.33□□□□□ -0.43
PTPRN2-203ENST00000389418 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 ETFAP13804 333 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 CD6P30203 668 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 CCR7P32248 378 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 INHBCP55103 352 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 CTBSQ01459 385 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 TSTQ16762 297 aaKnown RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 PAGE3Q5JUK9 113 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 LINGO2Q7L985 606 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 GALNTL5Q7Z4T8 443 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 CDH24Q86UP0 819 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 SGTBQ96EQ0 304 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 UNC119BA6NIH7 251 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 VSTM2BA6NLU5 285 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 J3QLW9 94 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 J3QRK9 145 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF19P17023 458 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 IST1P53990 364 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 HORMAD2Q8N7B1 307 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 TUBA1CQ9BQE3 449 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 NPIPA2E9PIF3 369 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 NPIPA3F8WFD2 350 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 PRLP01236 227 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 EIF5AP63241 154 aaKnown RBP12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 VEZF1Q14119 521 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 NFATC4Q14934 902 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 IRF4Q15306 451 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 ALDH16A1Q8IZ83 802 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 PGBD5Q8N414 524 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 TEX26Q8N6G2 289 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
PTPRN2-203ENST00000389418 RASAL1O95294 804 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 RETP07949 1114 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CHAF1BQ13112 559 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ARHGAP11AQ6P4F7 1023 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 DENND6BQ8NEG7 585 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 OMA1Q96E52 524 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 MS4A4EQ96PG1 132 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF221Q9UK13 617 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 GXYLT2A0PJZ3 443 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 SLC22A31A6NKX4 558 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ADAP00813 363 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 S1PR1P21453 382 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 DCKP27707 260 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CASP6P55212 293 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZFP69Q49AA0 526 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 C6orf141Q5SZD1 244 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF101Q8IZC7 436 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CNIH3Q8TBE1 160 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 NEIL2Q969S2 332 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 TM9SF2Q99805 663 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 POT1Q9NUX5 634 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CACNG3O60359 315 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 KDM4BO94953 1096 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 GABRB3P28472 473 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CD38P28907 300 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ENPP6Q6UWR7 440 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 PRR22Q8IZ63 422 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF420Q8TAQ5 688 aaPredicted RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 PCDHGA7Q9Y5G6 932 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ARID1AO14497 2285 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 VILLO15195 856 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 RLN2P04090 185 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 P04436 131 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ITGB8P26012 769 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 AOAHP28039 575 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 CLRN1P58418 232 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 NSMAFQ92636 917 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 EGLN2Q96KS0 407 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 ATOH8Q96SQ7 321 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
PTPRN2-203ENST00000389418 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms