RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SLC13A4Q9UKG4 626 aa12.54□□□□□ -0.4
LCMT1-201ENST00000380962 PILRAQ9UKJ1 303 aa12.54□□□□□ -0.4
LCMT1-201ENST00000380962 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
LCMT1-201ENST00000380962 RPL36Q9Y3U8 105 aaKnown RBP12.54□□□□□ -0.4
LCMT1-201ENST00000380962 CCDC88CQ9P219 2028 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 F5P12259 2224 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 KIR2DS5A0A0G2JLQ3 304 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 A0A0G2JNG1 304 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 GLOD5A6NK44 160 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PRAMEF26H0Y7S4 382 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 KIR2DS3K7RE56 304 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 MAN1A2O60476 641 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PRKRAO75569 313 aaKnown RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 RASGRP1O95267 797 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 NADKO95544 446 aaPredicted RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 TNFP01375 233 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 ZNF888P0CJ79 500 aaPredicted RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 CPN2P22792 545 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 ACSL1P33121 698 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 FEN1P39748 380 aaKnown RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 OPRL1P41146 370 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 GSSP48637 474 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 LIMK1P53667 647 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PRKAG1P54619 331 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 VBP1P61758 197 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 DUSP2Q05923 314 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 DLX2Q07687 328 aaPredicted RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 TARDBPQ13148 414 aaKnown RBP eCLIP12.53□□□□□ -0.46e-6■■■■□ 20.5
LCMT1-201ENST00000380962 KIR2DS5Q14953 304 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 NR1D2Q14995 579 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 FAM214AQ32MH5 1076 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PODNL1Q6PEZ8 512 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 LACC1Q8IV20 430 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 SMRP1Q8NCR6 262 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 OR4K14Q8NGD5 310 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 NDNFQ8TB73 568 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 FAM174AQ8TBP5 190 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 GPBAR1Q8TDU6 330 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PMM1Q92871 262 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 GSDMCQ9BYG8 508 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 TMEM168Q9H0V1 697 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 MMP27Q9H306 513 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 EVA1AQ9H8M9 152 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 SYNPO2LQ9H987 977 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 KCNK12Q9HB15 430 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
LCMT1-201ENST00000380962 MAN2C1Q9NTJ4 1040 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 KLHL28Q9NXS3 571 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 ERGIC3Q9Y282 383 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
LCMT1-201ENST00000380962 C2orf74A8MZ97 194 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 M0R3H8 397 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 SOX30O94993 753 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 SEMA4FO95754 770 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 EPPINO95925 133 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 NR4A1P22736 598 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 POU1F1P28069 291 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 MC3RP41968 323 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 NUDT6P53370 316 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 UBE2IP63279 158 aaKnown RBP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 TRAM2Q15035 370 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 ZNF311Q5JNZ3 666 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 TPRG1LQ5T0D9 272 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 MFSD4BQ5TF39 518 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 ZCCHC12Q6PEW1 402 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 TUBA3EQ6PEY2 450 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 RNF44Q7L0R7 432 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 C16orf62Q7Z3J2 963 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 MRGPREQ86SM8 312 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 TRIM48Q8IWZ4 208 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 OR2L13Q8N349 312 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 AMER2Q8N7J2 671 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 DRAXINQ8NBI3 349 aaPredicted RBP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 KCT2Q8NC54 265 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 OR4K5Q8NGD3 323 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 OR6T1Q8NGN1 323 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 OR9A2Q8NGT5 310 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 GNPDA2Q8TDQ7 276 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 ADAMTS15Q8TE58 950 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 COX4I2Q96KJ9 171 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 MACROD1Q9BQ69 325 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 SLIRPQ9GZT3 109 aaKnown RBP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 DCSTAMPQ9H295 470 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 GALNT8Q9NY28 637 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 CLDND1Q9NY35 253 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.52□□□□□ -0.4
LCMT1-201ENST00000380962 DAPP1Q9UN19 280 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 SLC22A7Q9Y694 548 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 SPACA6W5XKT8 324 aa12.52□□□□□ -0.4
LCMT1-201ENST00000380962 CEP290O15078 2479 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms