RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SLC41A1Q8IVJ1 513 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NAXDQ8IW45 347 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PYROXD2Q8N2H3 581 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PRSS35Q8N3Z0 413 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 C9orf43Q8TAL5 461 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 IFI44Q8TCB0 444 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 IFT27Q9BW83 186 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 POLDIP3Q9BY77 421 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NLNQ9BYT8 704 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SPATC1LQ9H0A9 340 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 DPAGT1Q9H3H5 408 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 RLFQ13129 1914 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PLSCR5A0PG75 271 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM218A2RU14 115 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM210A6NLX4 147 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PRR23D1E9PI22 279 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 HSPA12AO43301 675 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 FADS1O60427 444 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 EEDO75530 441 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 EDN1P05305 212 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PRR23D2P0DMB1 279 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PPP3CBP16298 524 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NFYBP25208 207 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 S100A2P29034 98 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 CTBP2P56545 445 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SPRYD7Q5W111 196 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 TRNP1Q6NT89 227 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 DEGS2Q6QHC5 323 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PDZD4Q76G19 769 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ARMC10Q8N2F6 343 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SYNPOQ8N3V7 929 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 C3orf49Q96BT1 292 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 HHATLQ9HCP6 504 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NLGN3Q9NZ94 848 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ARHGAP28Q9P2N2 729 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 OR12D3Q9UGF7 316 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ADAMTS5Q9UNA0 930 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 B4E171 279 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CXCL11O14625 94 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 ARPC5O15511 151 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 LGI1O95970 557 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 OR4E1P0C645 316 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 HIST1H1BP16401 226 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 C5AR1P21730 350 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 MST1P26927 711 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RAB5CP51148 216 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 ZP1P60852 638 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 MELKQ14680 651 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SURF2Q15527 256 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CERCAMQ5T4B2 595 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 KIAA1211LQ6NV74 962 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 FAM111BQ6SJ93 734 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 GDPGP1Q6ZNW5 385 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 OR9Q1Q8NGQ5 310 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SPPL3Q8TCT6 385 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 EGFL8Q99944 293 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CCDC86Q9H6F5 360 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CNTN6Q9UQ52 1028 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 MRPS23Q9Y3D9 190 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CHST2Q9Y4C5 530 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 PAPPA2Q9BXP8 1791 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM72A0PK05 275 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 A8MXE2 369 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 MBTPS2O43462 519 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 ACPPP15309 386 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 NME1P15531 152 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RGS4P49798 205 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RBBP4Q09028 425 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 GRB14Q14449 540 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF239Q16600 458 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 INO80DQ53TQ3 878 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CARD16Q5EG05 197 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CELF3Q5SZQ8 465 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 OR52W1Q6IF63 320 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SLC30A6Q6NXT4 461 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TMUB2Q71RG4 321 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TSPAN33Q86UF1 283 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TRAM1L1Q8N609 369 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CLDN22Q8N7P3 220 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 ST7LQ8TDW4 575 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TEX37Q96LM6 180 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 UBIAD1Q9Y5Z9 338 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 MRPL42Q9Y6G3 142 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 KDM4EB2RXH2 506 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 AP4M1O00189 453 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 GFRA2O00451 464 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 PIP5K1BO14986 540 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 IL1AP01583 271 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
PTPRA-204ENST00000380393 GOT1P17174 413 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 CAV3P56539 151 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 RCAN2Q14206 197 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 PGM5Q15124 567 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 DUOXA1Q1HG43 343 aa8.87□□□□□ -0.99
PTPRA-204ENST00000380393 SLC35D3Q5M8T2 416 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms