RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CASP12Q6UXS9 341 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM184AQ6ZMB5 413 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 NRROSQ86YC3 692 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 GPR26Q8NDV2 337 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 OR1J4Q8NGS1 313 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 THAP4Q8WY91 577 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 NELL1Q92832 810 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 OR52E6Q96RD3 313 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 VN1R3Q9BXE9 311 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 C12orf49Q9H741 205 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 CHODLQ9H9P2 273 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 EXOSC4Q9NPD3 245 aaKnown RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 TBC1D29Q9UFV1 150 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 BTBD3Q9Y2F9 522 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ATP23Q9Y6H3 246 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 H0YGG7 62 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 H3BNX3 289 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 BCAS2O75934 225 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 OR4F21O95013 312 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 CHRM5P08912 532 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 DBTP11182 482 aaKnown RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 GABRB3P28472 473 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 RAD52P43351 418 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 STC1P52823 247 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ARF3P61204 181 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 HERVK_113P63132 956 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ERVK-8P63133 956 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 PMS2P3Q13401 168 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 EXT1Q16394 746 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 PIGGQ5H8A4 983 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 NADSYN1Q6IA69 706 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 CDC73Q6P1J9 531 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 Q6ZNX1 250 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 PAQR9Q6ZVX9 377 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 PDZD3Q86UT5 571 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 TRIM69Q86WT6 500 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 KLHDC8AQ8IYD2 350 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 LILRA2Q8N149 483 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 OR7A2PQ8NGA2 310 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 STT3BQ8TCJ2 826 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 UBASH3BQ8TF42 649 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 OLFM1Q99784 485 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 NPLQ9BXD5 320 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ERVK-6Q9BXR3 956 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 LYARQ9NX58 379 aaKnown RBP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
NEDD9-202ENST00000379446 ERVK-19Q9WJR5 959 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 BOLA1Q9Y3E2 137 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 LRRK2Q5S007 2527 aa6.19□□□□□ -1.42
NEDD9-202ENST00000379446 LOC100506127A0A0U1RQW1 187 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 AZIN1O14977 448 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PLRG1O43660 514 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 NUDT21O43809 227 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 UGT2B7P16662 529 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CD82P27701 267 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ACADLP28330 430 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 GPR3P46089 330 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 LEPRP48357 1165 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SERPINB10P48595 397 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 RPS13P62277 151 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CHRNB3Q05901 458 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 AIMP2Q13155 320 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PDE7AQ13946 482 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM35AQ53FP2 167 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EEF1A1P5Q5VTE0 462 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 NANOGP8Q6NSW7 305 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ALKAL1Q6UXT8 129 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 AADATQ8N5Z0 425 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 FUBP1Q96AE4 644 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EPYCQ99645 322 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 KIFC1Q9BW19 673 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TRIM2Q9C040 744 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CCNB1IP1Q9NPC3 277 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM74BQ9NUR3 256 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 MARK1Q9P0L2 795 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SERGEFQ9UGK8 458 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ERRFI1Q9UJM3 462 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 A0A1W2PP18 115 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CLDN25C9JDP6 229 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EIF3FO00303 357 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF195O14628 629 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ZIC2O95409 532 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 GNALP38405 381 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 IL5RAQ01344 420 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 LASP1Q14847 261 aaKnown RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 RAB39AQ14964 217 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ZBED5Q49AG3 693 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF766Q5HY98 468 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 OTUD1Q5VV17 481 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-202ENST00000379446 PRMT9Q6P2P2 845 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 SPESP1Q6UW49 350 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 KIAA0408Q6ZU52 694 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 CREB3L4Q8TEY5 395 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 EEF1AKMT1Q8WVE0 214 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 TWIST2Q8WVJ9 160 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 RBP7Q96R05 134 aa6.18□□□□□ -1.42
NEDD9-202ENST00000379446 OR5B2Q96R09 309 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms