RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ZNF615Q8N8J6 731 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 OR56B4Q8NH76 319 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 FCRL2Q96LA5 508 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 LTB4R2Q9NPC1 389 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 C1orf109Q9NX04 203 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 ACSL6Q9UKU0 697 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 DTX4Q9Y2E6 619 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 UBR2Q8IWV8 1755 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 LRRN3E7EW58 273 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 SUV39H1O43463 412 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 PIP5K1CO60331 668 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 PRKRAO75569 313 aaKnown RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 DIRAS1O95057 198 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 C1RP00736 705 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 TCRBP04435 133 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 G6PDP11413 515 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 ARHGEF7Q14155 803 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 OR8G1Q15617 311 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 CTXN3Q4LDR2 81 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 SYTL3Q4VX76 610 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM192Q8IY95 271 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 CLDN22Q8N7P3 220 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 POMGNT2Q8NAT1 580 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 TMED9Q9BVK6 235 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 TSPAN10Q9H1Z9 355 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 LRRN3Q9H3W5 708 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 CACNA1SQ13698 1873 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 M0R143 59 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 FZD9O00144 591 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 ENTPD6O75354 484 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 CD1EP15812 388 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 PTSQ03393 145 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SKP2Q13309 424 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 CRHR2Q13324 411 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 DDX39BQ13838 428 aaKnown RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 UGT3A2Q3SY77 523 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 ESRP1Q6NXG1 681 aaKnown RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 USP50Q70EL3 339 aaPredicted RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 PPTC7Q8NI37 304 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 MBOAT4Q96T53 435 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SEMA3CQ99985 751 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SEC14L3Q9UDX4 400 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 MRPL42Q9Y6G3 142 aaKnown RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 ABHD14A-ACY1A0A1B0GW23 586 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 CHST10O43529 356 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 PTHP01270 115 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 FGF1P05230 155 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 CALCRP30988 508 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SPAM1P38567 509 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 CEBPGP53567 150 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 ATXN7L3Q14CW9 347 aaPredicted RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 PTCHD3Q3KNS1 767 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 RNASE10Q5GAN6 216 aaKnown RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 UQCC3Q6UW78 93 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SERINC5Q86VE9 423 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.62
NPHP4-202ENST00000378161 OR9A2Q8NGT5 310 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 IL4I1Q96RQ9 567 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 MYOCQ99972 504 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 OR10A4Q9H209 315 aa11.21□□□□□ -0.62
NPHP4-202ENST00000378161 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR6C68A6NDL8 312 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 PFKMP08237 780 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GGT1P19440 569 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GKP32189 559 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 EMX2Q04743 252 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 PTPRNQ16849 979 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR10G2Q8NGC3 310 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR10Q1Q8NGQ4 319 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR14K1Q8NGZ2 314 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 GGHQ92820 318 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 OR52E6Q96RD3 313 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 NELL2Q99435 816 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ACTL8Q9H568 366 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 CTPS2Q9NRF8 586 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SEC14L5O43304 696 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF888P0CJ79 500 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-202ENST00000378161 ITGA3P26006 1051 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 DLX5P56178 289 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 MAXP61244 160 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 RHOAP61586 193 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SOWAHAQ2M3V2 549 aa11.2□□□□□ -0.62
NPHP4-202ENST00000378161 SUSD1Q6UWL2 747 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms