RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 NINJ1Q92982 152 aa16.91■□□□□ 0.3
CNTNAP3-204ENST00000377656 CREB3L1Q96BA8 519 aa16.91■□□□□ 0.3
CNTNAP3-204ENST00000377656 SLC46A2Q9BY10 475 aa16.91■□□□□ 0.3
CNTNAP3-204ENST00000377656 RDH14Q9HBH5 336 aa16.91■□□□□ 0.3
CNTNAP3-204ENST00000377656 SDC3O75056 442 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 JRKO75564 520 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 VNN2O95498 520 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 RPS17P08708 135 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 DPPA4Q7L190 304 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 SLC5A8Q8N695 610 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 OR2T4Q8NH00 348 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 CREB3L4Q8TEY5 395 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ZNF431Q8TF32 576 aaPredicted RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 DIO2Q92813 273 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 NAA11Q9BSU3 229 aaPredicted RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 APOOQ9BUR5 198 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ARNT2Q9HBZ2 717 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 TRAV6A0A075B6T7 132 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 SLC1A7O00341 560 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 DENRO43583 198 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 BMP2P12643 396 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 MTNR1AP48039 350 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 DSC1Q08554 894 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 GRIN2CQ14957 1233 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 HSD11B1LQ7Z5J1 315 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 SPAG16Q8N0X2 631 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 FKBP10Q96AY3 582 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 MSLNLQ96KJ4 702 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 CLSTN3Q9BQT9 956 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 URM1Q9BTM9 101 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 TMEM165Q9HC07 324 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 GSKIPQ9P0R6 139 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 MYH1P12882 1939 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 SMAD9O15198 467 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 PRAMEF2O60811 474 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ARSAP15289 507 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 RBMXP38159 391 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 TMEM69Q5SWH9 247 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 LRRN1Q6UXK5 716 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 MS4A15Q8N5U1 240 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 GATAD2BQ8WXI9 593 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 CNN2Q99439 309 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ST14Q9Y5Y6 855 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ANTXRLA6NF34 631 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 OR52A4PA6NMU1 304 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ERCC1P07992 297 aaPredicted RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 ANXA3P12429 323 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 HSD11B2P80365 405 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 SERTAD2Q14140 314 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 RAB41Q5JT25 222 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 FAM69BQ5VUD6 431 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 CARD17Q5XLA6 110 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 MAMDC2Q7Z304 686 aaPredicted RBP16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 NRMQ8IXM6 262 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 OR52E2Q8NGJ4 325 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 PGAM5Q96HS1 289 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 HSPB11Q9Y547 144 aa16.9■□□□□ 0.3
CNTNAP3-204ENST00000377656 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 CIB4A0PJX0 185 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 KIAA0513O60268 411 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 CEBPBP17676 345 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 RIDAP52758 137 aaKnown RBP16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 GABARAPL2P60520 117 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 NKAPLQ5M9Q1 402 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 FAM180BQ6P0A1 224 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 TLDC1Q6P9B6 456 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 LIPIQ6XZB0 460 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 PDZD3Q86UT5 571 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 CENPSQ8N2Z9 138 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 TRMT2BQ96GJ1 504 aaKnown RBP16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 ZNF696Q9H7X3 374 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 PCDHGA7Q9Y5G6 932 aa16.89■□□□□ 0.3
CNTNAP3-204ENST00000377656 LOC285095A0A1B0GVY8 99 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 FMO6PO60774 539 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 RAD51DO75771 328 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 ZNF140P52738 457 aaPredicted RBP16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 PAGE3Q5JUK9 113 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 LCTLQ6UWM7 567 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 TRIM73Q86UV7 250 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 CDRT4Q8N9R6 151 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 NETO1Q8TDF5 533 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 ELP5Q8TE02 316 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 SERINC2Q96SA4 455 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 INPP5KQ9BT40 448 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 TREX1Q9NSU2 369 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 SH3D21A4FU49 640 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 ZNF16P17020 682 aaPredicted RBP16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 UGT2B10P36537 528 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 IST1P53990 364 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 FOXA1P55317 472 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 AKAP1Q92667 903 aaKnown RBP eCLIP16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 SLC5A7Q9GZV3 580 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 HPF1Q9NWY4 346 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 DNMT3AQ9Y6K1 912 aaPredicted RBP16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
CNTNAP3-204ENST00000377656 LSM1O15116 133 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms