RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ANKRD33BA6NCL7 494 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 FAM47E-STBD1D6RA91 191 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 KRT15P19012 456 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 KIR2DL3P43628 341 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 NRG3P56975 720 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 BTKQ06187 659 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 EXOSC7Q15024 291 aaKnown RBP17.54■□□□□ 0.4
CBWD3-204ENST00000377349 FBXL19-AS1Q494R0 122 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 BICRALQ6AI39 1079 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 ADCY4Q8NFM4 1077 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 NTNG2Q96CW9 530 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 FAIM2Q9BWQ8 316 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 CLEC4MQ9H2X3 399 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-204ENST00000377349 UBQLN3Q9H347 655 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 BRF2Q9HAW0 419 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 VPS29Q9UBQ0 182 aa17.54■□□□□ 0.4
CBWD3-204ENST00000377349 C1orf226A1L170 272 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 HSPB2A8KAH6 182 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 TP53I11O14683 189 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 ULK1O75385 1050 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 EPPINO95925 133 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 CHN1P15882 459 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 GDF1P27539 372 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 GALNSP34059 522 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 MASP1P48740 699 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 DUSP8Q13202 625 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 TOMM20Q15388 145 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 HSPB2Q16082 182 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 SLC48A1Q6P1K1 146 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 FAM111BQ6SJ93 734 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 SCIMPQ6UWF3 145 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 VWA5B2Q8N398 1253 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 LIX1Q8N485 282 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 CCDC63Q8NA47 563 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 KCNA7Q96RP8 456 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF382Q96SR6 550 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 C1QTNF3Q9BXJ4 246 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 EBPLQ9BY08 206 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 RYDENQ9NUL5 291 aaKnown RBP17.53■□□□□ 0.4
CBWD3-204ENST00000377349 TIMM22Q9Y584 194 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF780BQ9Y6R6 833 aa17.53■□□□□ 0.4
CBWD3-204ENST00000377349 ABCA2Q9BZC7 2435 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 PCNX3Q9H6A9 2034 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 CAPN14A8MX76 684 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 PCDH7O60245 1069 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 CRCPO75575 148 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 HOXB4P17483 251 aaPredicted RBP17.52■□□□□ 0.4
CBWD3-204ENST00000377349 IMPDH1P20839 514 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 UQCRC1P31930 480 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 HTR6P50406 440 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 ASCL1P50553 236 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 HMGCS1Q01581 520 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 LCP2Q13094 533 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 RPS6KA2Q15349 733 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 SLC22A9Q8IVM8 553 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF597Q96LX8 424 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 TIMP4Q99727 224 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 MID1IP1Q9NPA3 183 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 UTS2RQ9UKP6 389 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 PSME2Q9UL46 239 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 CBLCQ9ULV8 474 aa17.52■□□□□ 0.4
CBWD3-204ENST00000377349 C15orf38-AP3S2A0A0A6YYH1 394 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 A0A1W2PPM1 405 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 A6NNC1 897 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 AHRRA9YTQ3 701 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 TRAPPC6AO75865 159 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 MYL2P10916 166 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 CSNK2A2P19784 350 aaPredicted RBP17.51■□□□□ 0.39
CBWD3-204ENST00000377349 KLK2P20151 261 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 BMP5P22003 454 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 TIMP3P35625 211 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 TMED10P49755 219 aaKnown RBP17.51■□□□□ 0.39
CBWD3-204ENST00000377349 ZNF136P52737 540 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 CSTF3Q12996 717 aaKnown RBP17.51■□□□□ 0.39
CBWD3-204ENST00000377349 LTB4RQ15722 352 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 CEBPEQ15744 281 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 FLYWCH1Q4VC44 716 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 SPDYAQ5MJ70 313 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 LCA5Q86VQ0 697 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 CDC20BQ86Y33 519 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 RNASE6Q93091 150 aaKnown RBP17.51■□□□□ 0.39
CBWD3-204ENST00000377349 ADIPOR1Q96A54 375 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 TP53INP1Q96A56 240 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 EXOSC8Q96B26 276 aaKnown RBP17.51■□□□□ 0.39
CBWD3-204ENST00000377349 TM4SF18Q96CE8 201 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 PRDM14Q9GZV8 571 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 DLL4Q9NR61 685 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 EHD3Q9NZN3 535 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 DTX4Q9Y2E6 619 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 STK38LQ9Y2H1 464 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 PLEKHA6Q9Y2H5 1048 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 NPFFR2Q9Y5X5 522 aa17.51■□□□□ 0.39
CBWD3-204ENST00000377349 SHBGP04278 402 aa17.5■□□□□ 0.39
CBWD3-204ENST00000377349 HPNP05981 417 aa17.5■□□□□ 0.39
CBWD3-204ENST00000377349 IL3P08700 152 aa17.5■□□□□ 0.39
CBWD3-204ENST00000377349 CDK9P50750 372 aaKnown RBP17.5■□□□□ 0.39
CBWD3-204ENST00000377349 PRKAA2P54646 552 aa17.5■□□□□ 0.39
CBWD3-204ENST00000377349 MRPS35P82673 323 aaKnown RBP17.5■□□□□ 0.39
CBWD3-204ENST00000377349 DUSP2Q05923 314 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms