RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ACTRT3Q9BYD9 372 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 MAT2BQ9NZL9 334 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 TNRC6BQ9UPQ9 1833 aaKnown RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 CCDC163A0A0D9SF12 145 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 OR10H2O60403 315 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 TNFAIP8O95379 198 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 NTN1O95631 604 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 IFNW1P05000 195 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 LINGO3P0C6S8 592 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 XCR1P46094 333 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 KCNJ5P48544 419 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 CRISP3P54108 245 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 C1orf189Q5VU69 101 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 PRSS58Q8IYP2 241 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 OR2L13Q8N349 312 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 SLC5A8Q8N695 610 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 SAP25Q8TEE9 199 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 SGCDQ92629 289 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 FEVQ99581 238 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 SLC38A1Q9H2H9 487 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 PNPLA3Q9NST1 481 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 USE1Q9NZ43 259 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 GPC6Q9Y625 555 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 LY6G6EA0A0G2JKS1 128 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 A0A1B0GTQ1 180 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 EPHA4P54764 986 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 MGAT2Q10469 447 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 DUSP8Q13202 625 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 PRICKLE4Q2TBC4 344 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 FHL5Q5TD97 284 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 USP51Q70EK9 711 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 KANSL1Q7Z3B3 1105 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 SATL1Q86VE3 508 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 RMND5BQ96G75 393 aaPredicted RBP11.77□□□□□ -0.52
CLCN6-206ENST00000376496 MS4A4EQ96PG1 132 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 ZNF607Q96SK3 696 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 PHOX2BQ99453 314 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 GRIP2Q9C0E4 1043 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 ACER3Q9NUN7 267 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 IFT80Q9P2H3 777 aaPredicted RBP11.77□□□□□ -0.52
CLCN6-206ENST00000376496 EPHA6Q9UF33 1036 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 PCDHGB3Q9Y5G1 929 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 PCDHGA8Q9Y5G5 932 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 CSNK1G3Q9Y6M4 447 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 U3KQA8 63 aa11.77□□□□□ -0.52
CLCN6-206ENST00000376496 H3BNH8 94 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 OR6B1O95007 311 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 HPRP00739 348 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 SSTR4P31391 388 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 RXRGP48443 463 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 TPD52P55327 224 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 HSD11B2P80365 405 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 PIN1Q13526 163 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 NNATQ16517 81 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 MEP1AQ16819 746 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 FIGNL1Q6PIW4 674 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF574Q6ZN55 896 aaPredicted RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 NLGN4XQ8N0W4 816 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 LGI4Q8N135 537 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 OR51Q1Q8NH59 317 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 TANKQ92844 425 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 UBE2FQ969M7 185 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 PIP5K1AQ99755 562 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 NIPSNAP1Q9BPW8 284 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 GTPBP2Q9BX10 602 aaKnown RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 GIN1Q9NXP7 522 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 GMEB2Q9UKD1 530 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 NTNG1Q9Y2I2 539 aa11.77□□□□□ -0.53
CLCN6-206ENST00000376496 FAM32AQ9Y421 112 aaKnown RBP11.77□□□□□ -0.53
CLCN6-206ENST00000376496 TRBV4-1A0A0J9YWV2 114 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TMEM221A6NGB7 291 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 A8MVJ9 347 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 M0R296 226 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ATP1B1P05026 303 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PTNP21246 168 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 STX4Q12846 297 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 FAM214AQ32MH5 1076 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 KDM4DQ6B0I6 523 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 MEX3DQ86XN8 651 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 PLXDC1Q8IUK5 500 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 SLC30A8Q8IWU4 369 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 METTL25Q8N6Q8 603 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 GTPBP3Q969Y2 492 aaKnown RBP11.76□□□□□ -0.53
CLCN6-206ENST00000376496 MOAP1Q96BY2 351 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF285Q96NJ3 590 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ALOXE3Q9BYJ1 711 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
CLCN6-206ENST00000376496 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms