RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SCGB2A1O75556 95 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 HTR2BP41595 481 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 RPL26P61254 145 aaKnown RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 PIGGQ5H8A4 983 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM31Q5JXX7 168 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ASRGL1Q7L266 308 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 HLA-CQ95604 372 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 PPP4R1LQ9P1A2 415 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 TRBV2A0A0J9YWF9 115 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 HSBP1L1C9JCN9 74 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 LILRB5O75023 590 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 DIRAS3O95661 229 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 TSPAN15O95858 294 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ERCC1P07992 297 aaPredicted RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 CDKN2CP42773 168 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 SLC6A11P48066 632 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 DYRK1AQ13627 763 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 UGT2A3Q6UWM9 527 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM107Q6UX40 140 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 FGF13Q92913 245 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 BORCS7Q96B45 105 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ASF1BQ9NVP2 202 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF217O75362 1048 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 SNAP29O95721 258 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 CSTAP01040 98 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ADORA3P0DMS8 318 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 RING1Q06587 406 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 GSG1LQ6UXU4 331 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 PLEKHG7Q6ZR37 379 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 SHISA6Q6ZSJ9 500 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 MUS81Q96NY9 551 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 F2RL3Q96RI0 385 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 GPR22Q99680 433 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 SEC14L5O43304 696 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ATE1O95260 518 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 CD34P28906 385 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 BCL2A1Q16548 175 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 FAM214AQ32MH5 1076 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF783Q6ZMS7 281 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ARHGAP12Q8IWW6 846 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 ESX1Q8N693 406 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 OR2T33Q8NG76 320 aa13.64□□□□□ -0.23
TRAF1-201ENST00000373887 IMP4Q96G21 291 aaKnown RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 FBRSL1Q9HCM7 1045 aaKnown RBP13.64□□□□□ -0.23
TRAF1-201ENST00000373887 HIDE1A8MVS5 230 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RTCAO00442 366 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 CASC3O15234 703 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ALDH3B2P48448 385 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SHQ1Q6PI26 577 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 MALSU1Q96EH3 234 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NELL2Q99435 816 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 URM1Q9BTM9 101 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PAPOLGQ9BWT3 736 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 BOCQ9BWV1 1114 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 WDR6Q9NNW5 1121 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PTGDR2Q9Y5Y4 395 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 MAOBP27338 520 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 GMPRP36959 345 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RPS15P62841 145 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF763Q0D2J5 394 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SLC36A3Q495N2 470 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NRROSQ86YC3 692 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 FAM217AQ8IXS0 508 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 OR14K1Q8NGZ2 314 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 KIAA1191Q96A73 305 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ZBTB20Q9HC78 741 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RARRES3Q9UL19 164 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RNF215Q9Y6U7 377 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 DNAJC25-GNG10A0A024R161 153 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF45Q02386 682 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RSU1Q15404 277 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 MARVELD2Q8N4S9 558 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PNPLA1Q8N8W4 532 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SPRYD4Q8WW59 207 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ARL5BQ96KC2 179 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 MYRFLQ96LU7 910 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RXFP3Q9NSD7 469 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PAK1IP1Q9NWT1 392 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 FETUBQ9UGM5 382 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ACSL6Q9UKU0 697 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 LSM5Q9Y4Y9 91 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PRSS51A0A1B0GVH4 220 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 FXYD4P59646 89 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms