RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ZNF730Q6ZMV8 503 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 KDM8Q8N371 416 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZBTB45Q96K62 511 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC2A13Q96QE2 648 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 COMMD4Q9H0A8 199 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ADAP2Q9NPF8 381 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 EQTNQ9NQ60 294 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 KCNK6Q9Y257 313 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 NUMBLQ9Y6R0 609 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 A0A087WZY1 265 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CCDC163A0A0D9SF12 145 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ELOVL7A1L3X0 281 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SMIM30A4D0T7 59 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PMS2P1A4D2B8 440 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 DCNP07585 359 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 BPGMP07738 259 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 KHKP50053 298 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 IDH3GP51553 393 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 WNT3AP56704 352 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MLF1P58340 268 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PRKCDQ05655 676 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PPP1R3AQ16821 1122 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ZMAT1Q5H9K5 638 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CPTPQ5TA50 214 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MAMDC4Q6UXC1 1216 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SLC51BQ86UW2 128 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 OR5T2Q8NGG2 359 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ART4Q93070 314 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 BIRC8Q96P09 236 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PDZD7Q9H5P4 517 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ZDHHC11Q9H8X9 412 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 EBF2Q9HAK2 575 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 BEX1Q9HBH7 125 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PNPOQ9NVS9 261 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 LYPLA1O75608 230 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 STK16O75716 305 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CBR3O75828 277 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SCELO95171 688 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 GSRP00390 522 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 OAS1P00973 400 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CD72P21854 359 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PKLRP30613 574 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 HOXD13P35453 343 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CAV3P56539 151 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PLCXD2Q0VAA5 305 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 DEFB109BQ30KR1 87 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 FAM205BPQ63HN1 556 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PAMR1Q6UXH9 720 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 IDO2Q6ZQW0 420 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 LRTOMTQ8WZ04 291 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 DYRK2Q92630 601 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PTERQ96BW5 349 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SPATA13Q96N96 652 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF670Q9BS34 389 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 OR51V1Q9H2C8 321 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MTG2Q9H4K7 406 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 AGO3Q9H9G7 860 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PAPPAQ13219 1627 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MTMR11A4FU01 709 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 WASH4PA8MWX3 477 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 AQP9O43315 295 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 STAG3L2P0CL84 134 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 RAB6AP20340 208 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CTSSP25774 331 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CD27P26842 260 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 APLNRP35414 380 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ACAA2P42765 397 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 KCNJ10P78508 379 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MEP1AQ16819 746 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 C9orf152Q5JTZ5 239 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 Q6ZVU0 165 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 CDH26Q8IXH8 852 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 IFI44Q8TCB0 444 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF384Q8TF68 577 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 FUNDC2Q9BWH2 189 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 MYNNQ9NPC7 610 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SNX15Q9NRS6 342 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 LUZP4Q9P127 313 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SLC7A11Q9UPY5 501 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 A0A087WUU8 490 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SIGLEC16A6NMB1 481 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 H3BSA7 217 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ADAMTS3O15072 1205 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 LRRTM2O43300 516 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 KIAA0513O60268 411 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 IFNW1P05000 195 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 ADRA1BP35368 520 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 TMPRSS3P57727 454 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 SLC26A5P58743 744 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PSMA6P60900 246 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 RPL23AP62750 156 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 PRAMEF14Q5SWL7 426 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 FAM69AQ5T7M9 428 aa8.24□□□□□ -1.09
SYNE1-206ENST00000367253 RNASEH2BQ5TBB1 312 aaKnown RBP8.24□□□□□ -1.09
SYNE1-206ENST00000367253 NT5DC1Q5TFE4 455 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms